Gossypium hirsutum (upland cotton): 107938319
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Entry
107938319 CDS
T04793
Name
(RefSeq) ribosomal RNA processing protein 1 homolog
KO
K14849
ribosomal RNA-processing protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107938319
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107938319
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107938319
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107938319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
107938319
NCBI-ProteinID:
XP_016726914
UniProt:
A0A1U8MMU9
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Position
D06:2539910..2542186
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AA seq
559 aa
AA seq
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MAGSGAGEGPTLIKQLAACDKSSRDRAVRSLLDGWLPSQSEVSDEEMKRLWKGLFYCVWH
ADKLPAQTDLINKLSSVLPKLEPGLSLQYFSVFLLTMRREWTGIDKLRLDKFYLLIRRFL
NCFFVMLKKSSWDLDFMRRSIRVLVDGTFIADDKFQGNGVNYHIASIFLEEIRPFFPLRK
EVVEVLLEPFVGILGKVGDKVLVGKIRSNVFDVLVKTGRRLLELKQSGDEVDESDDVVVF
GTIGLVMGFSTKFYELGSSVDCCQGNRKAVLALHEEFLKLEKDLTSLGIDISIPEGNEGN
EEDEVPELIPVGGETDANVSNDVLEPVEVNITGSVKKATKKSKKAKKATGDNGKKTKKSK
KTECSPADQENDVKLPAEVASSNIEQNGDGDSITFTESVISNLQLQFEKVAAEVGLNSDV
ATACDLPKVNGAVSKKRKRAKGASGRKPQNGELTGEADGEGDGTAKTCENSTKRVRFSMK
SNLVWKPHSPLPPLSLRLPPSVTPRGSALKQGIPPGPIKEMAPMTKKGKKAKSVKKARKV
IKSMYPLVKRTKKLKSTSS
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggccggatccggagccggagaaggcccgaccctgataaagcaactcgcggcttgcgac
aagtcgagccgtgacagagccgtacggtctctcctcgatgggtggcttccttcacagagt
gaagtctccgatgaagagatgaaaaggctgtggaaaggtctcttctactgcgtttggcac
gccgacaagctgcccgctcagaccgacctcatcaacaagctttcctcggttctgccgaag
ctcgaacccggtctatctctccaatacttctccgtttttcttctcaccatgcgtcgtgag
tggaccgggattgataagttaaggttagataagttttacctcttaattcgtaggtttttg
aattgcttctttgttatgttgaagaaatcgtcgtgggatttggattttatgcgtcgttcg
attagggttttagttgatggtacatttatagctgatgataagtttcaaggtaatggcgtt
aattatcacattgcttcgatttttctcgaggaaattaggcccttttttccattaagaaag
gaggttgttgaggttctattggaaccgtttgttggaatcttggggaaagtgggtgataag
gttttggttgggaagataaggagcaatgtctttgatgtgcttgttaagacgggaaggaga
ttgctggagcttaagcagtccggtgatgaggttgatgaaagcgatgatgtagttgtgttc
gggacgattggtttagtgatggggttctctacaaagttctatgaattgggttcttcagta
gattgctgtcagggtaatagaaaggctgtgttggcattacatgaggaattcttgaagttg
gagaaggatttgacgtcattgggtattgatatttcgattcccgagggtaatgaaggcaat
gaagaagatgaggtacctgaattgatacctgttggtggtgagacagatgcgaatgtttca
aatgatgttttggagccagttgaagttaatattaccggttctgtgaagaaggccacaaag
aaaagcaagaaggccaaaaaggcaactggggacaatggtaaaaagactaagaaaagcaag
aaaactgaatgtagccctgcagatcaggagaatgatgttaagttacctgcagaggttgcc
agttctaatatcgagcagaatggtgatggggattctataacatttacggaatcagtgatt
tcaaaccttcagctccagtttgagaaggttgccgcagaagtgggtttgaatagcgatgtt
gcaactgcctgtgatttaccaaaagttaatggtgctgtctccaagaagagaaagagagca
aagggtgcgagtggccgaaaacctcagaatggggagctaactggtgaagctgatggtgaa
ggagatggaactgcgaaaacttgcgagaatagcacaaagagggtaagattttcaatgaaa
agcaatctggtttggaagccccacagtcctttacctccattaagtttgaggttacctccc
tctgttactcctagaggaagtgctcttaagcaaggaattcctccaggtcctataaaggaa
atggctcctatgactaagaagggaaagaaagctaaatctgtgaagaaggctcggaaagtg
ataaagagtatgtatcctctagtcaaacgcacaaagaaattgaaatctacttcctcttag
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