KEGG   Gossypium hirsutum (upland cotton): 107938391
Entry
107938391         CDS       T04793                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 7
  KO
K03132  transcription initiation factor TFIID subunit 7
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107938391
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107938391
   03036 Chromosome and associated proteins [BR:ghi03036]
    107938391
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107938391
   Coactivators
    SAGA/TFTC/STAGA complex
     107938391
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     107938391
SSDB
Motif
Pfam: TAFII55_N
Other DBs
NCBI-GeneID: 107938391
NCBI-ProteinID: XP_016727016
UniProt: A0A1U8MN41
LinkDB
Position
A08:complement(1369242..1373541)
AA seq 200 aa
MDEQFILRVPPSVAERINRLLSENASSSEDKSLDLEFSEDGRTGTFVIGNDRFPASVLDL
PCVVESYKTYDDSALVKTADVGQMILVRESGEASPDVVEYRHGLTPPLRDARKRRFRREP
DLNPELVQRVEKDLVNIMSGGTVENLDADVNGQGDAGDENARNANKKAPPAAAAKPEVPD
TGGNAGEPDGSDSDDSDDSM
NT seq 603 nt   +upstreamnt  +downstreamnt
atggatgagcaattcattcttagagttccaccttctgtcgctgaacgcataaatcgtctt
ttaagtgaaaacgcttcatcttccgaggacaaatcactggatttggaattttctgaggat
ggacggaccggcacatttgtcattggcaatgatcgtttccctgcatctgtccttgatcta
ccttgtgttgttgagtcatacaaaacttacgacgatagtgcattggttaaaacagctgat
gtcggtcaaatgattttggtcagagagtctggagaagcttctccagatgtggtggaatac
agacacggtctaactcctccattgagggatgctcggaagcgaagatttcgaagggagcca
gatctaaatccagagctcgtacaacgtgttgaaaaagatttggtgaacatcatgtctgga
ggaacagttgaaaatctcgatgctgatgtcaatggacaaggtgatgcgggtgatgagaac
gctcgtaatgcgaataagaaagctccgcctgcagctgctgcaaagcctgaagttcccgat
acaggaggcaatgccggggaacctgatggatccgattctgatgactctgatgattcaatg
tga

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