Gossypium hirsutum (upland cotton): 107938432
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Entry
107938432 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107938432 isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107938432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107938432
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
107938432
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
107938432
NCBI-ProteinID:
XP_016727085
UniProt:
A0A1U8MJU5
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Position
A08:175860..181271
Genome browser
AA seq
1339 aa
AA seq
DB search
MMAIEKNNFKVSRIDSEFSSASRDTTSSTDEDELQRPSSAINSDGAGDDDDEDDDDDEFD
DADSGAGSDDFDLLELGEIGAEFCQVGNATCSVPFDLYDLPGLEDILSLDVWNECLSDEE
RFSLTKFLPDMDQDTFMWTLNDLLKGNNFHFGSPSKKLFDILKGGLCEPRVALYREGLNF
FQKRRHYHHLRMHQNNMVAKLCQTRDAWLNCRGYSIEERLRVLNIMRSQKILMYEKLEDE
DSESSERGDFGEGLWSRRVKDRKALQKKGHHGVDPTLESVSRGQMVGLEPSEYRKQNPKG
ILKARGSKFPSAKEFGGGVYPGLDIDTEPYGFHGTLPRQKYKSGAANRTRDQMRLDDDGE
DPMFGISIQQDRHAVHDSKSRKSGLLRAGKTYGLLRGEELAGDSFMALPPSSKHDLRAYG
RNRDVNQFPDAKVYTSKPPNMRTPYDFAKKSKYSENHQQFAVGNQIKLMKGRTPQLPLKG
SRFDLSERTELFWQNKNQGEDFSVDSSVRSDDWNIRSRKCKMGPECPDKASSQQMNDRFL
FSDNRIKSSQEKIRGNHVQNGGPVMAVSKGSRAFLKNEETESDSSEQFDDDDDSNPLMRS
KFDYPSGVIEGSRQSSLKSGLDSRKIKSSKKDTMEDGWPLDGINRISEKSFGENVHVPGV
ESYYFKGKQKSKMHEISPLQNSASRAFGKVDRKKVSKLSKSGQLGEKLGDRLKMSSTKAY
PTEKRLKGEVVYDHPMSQRDYLLNYPVDEEDASPVTLPLADENNRRRTGKKGRSIETYDC
GEKPEASLLGCKTGKEYVGDVDRRGEDGNLQSNLQKRTDDSLSLKKKGKRKLEVDAVTSD
MEALEPHGAEVQVTDVEMEIKPQKKPFTLITPTVHTGFSFSIIHLLSAVRMAMITPLLED
SLEVGRPRREQNGKQEGGVNGVLSCENTATDPDQPVQRSIPSLTVQEIVNRVTVNPGDPC
ILETQEPLQDLVRGVLKIFSSKTAPLGAKGWKALVAYEKSTKSWYWVGPIMHSSNDHETI
EEVTSPEAWSLPHKMLVKLVDSFANWLKNGQETLQQIGSLPAPPLELMQVNLDEKERFRD
LRAQKSLNTISPSSEEVRAYFRREELLRYSIPDRAFSYTAADGKKSIVAPLRRGGGKPTS
KARDHFMLKRDRPPHVTILCLVRDAASRLPGSIGTRADVCTLIRDSQYIVEEVSDAQVNQ
IVSGALDRLHYERDPCVQFDGERKLWVYLHREREEEDFEDDGTSSTKKWKRQKKDTAEQS
DQGAVIAAFHAAGDQLGFDDDKKMETECEDRQNPEANADDSHASEQGHPITRNPLDANLV
QEDKLLCQENSTNEEFDDN
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaattgagaagaacaactttaaagtttcgcggattgattcggagttttcttct
gctagtagggataccacttcgtcaactgatgaggatgagcttcaacgtccaagctcagct
attaattctgatggtgctggtgatgatgatgatgaagacgatgatgatgatgaatttgat
gatgctgattcaggagcaggttcagatgactttgatttattggaattaggtgaaataggg
gctgaattttgccaagttggcaacgcgacttgttccgtaccttttgatttatatgatctg
cccgggttggaagatattttgtctcttgatgtctggaatgagtgtttaagtgatgaagag
agatttagcctgactaagtttttacctgatatggaccaggatacatttatgtggaccttg
aatgaccttcttaagggtaataattttcattttgggagtcctagtaagaagttgtttgat
atattgaaaggagggttgtgtgagccaagggttgccctttatcgggagggtttgaatttc
tttcaaaagcggcggcattaccatcatttgaggatgcatcagaataatatggttgctaaa
ctttgtcaaacaagggatgcttggcttaattgtaggggatacagtattgaggagcggctt
cgtgttttgaatattatgagaagtcaaaagattttgatgtatgaaaaattggaagatgag
gattctgaatcctccgaaagaggtgactttggtgaagggctgtggagcagaagggttaag
gaccgaaaagctttgcagaaaaagggtcaccatggggttgatcctactttagaatccgtt
tcgcgagggcagatggtgggtttggaaccatcagagtacaggaagcagaatccaaaaggt
atactgaaggcacgtggatcaaaatttccttctgcaaaggagtttggtggtggtgtttat
ccaggtttggatattgatactgagccatatggttttcatggaacccttcctcgacagaaa
tataagtcaggggcagcaaacaggacaagggatcagatgaggttagacgatgatggtgaa
gacccaatgtttggaattagtattcaacaggaccgacatgctgtgcatgatagcaaatca
cgcaaatctggtttgttgagagcagggaagacgtatggccttttaagaggggaagaatta
gctggtgacagtttcatggctttgcctccgtcttcaaagcatgatttgcgagcctatggt
aggaacagggatgtgaatcaatttcctgatgcaaaagtatacacgtcaaagccaccaaac
atgagaacaccctatgattttgccaaaaagtccaagtattctgaaaatcatcagcaattt
gctgttggaaatcagataaagcttatgaaaggcagaactccacaattgccactgaaaggg
agtcgatttgacttgtcggaacgcaccgaactgttttggcaaaataagaaccaaggggaa
gatttttctgtggattcttcagttagatctgatgattggaatattaggagcaggaaatgt
aaaatggggccagagtgtcctgataaagcttcctcacaacagatgaatgaccgattcttg
ttttctgataatcgaattaaatcatcacaagaaaagatcagagggaaccacgtgcaaaat
ggaggaccagtaatggctgtttcaaaaggtagtagagcattccttaaaaatgaagaaaca
gaatctgactcatctgaacagtttgatgacgacgatgatagcaatcctctaatgagaagc
aagtttgattacccaagtggtgtcattgaaggttcacggcagtcttcattgaagtctggc
cttgattctagaaagataaaatcttcaaagaaagatactatggaggatggatggcctctt
gatggaatcaatcgcatctctgaaaagagctttggggaaaatgtgcacgtgccaggagta
gaaagctactattttaaaggaaaacagaagtctaagatgcacgaaataagtcccttgcag
aactctgcttctagagcttttggcaaggttgataggaaaaaggtatccaagttgagcaaa
tctggccaattaggagagaaacttggtgacagattaaagatgtcctcaacaaaggcctac
cctactgagaaaaggctgaaaggtgaagttgtctatgatcatcctatgtctcaacgagat
tatctgcttaattatcctgttgatgaggaggatgcttcacctgtgacactaccattggca
gatgaaaataacaggcgtagaactgggaaaaaaggccggagcattgaaacatatgattgt
ggtgaaaaacctgaagcttcattgcttgggtgcaagacagggaaggagtatgtgggagat
gtcgacagaagaggtgaagatggtaacctgcagtctaaccttcagaagcgaactgatgat
tccctttccttgaaaaaaaagggaaaacggaaattggaggttgatgctgttacctcagat
atggaagctttggaaccacatggtgcagaagtgcaagttacagatgttgagatggaaatc
aaaccacagaaaaagccgtttactctgattacccctacagttcatactggtttctcattt
tcgattatacatcttctttctgctgttcgcatggcaatgatcactccacttctagaagat
tccttagaggttggcagacctcgcagggagcagaatggaaagcaggaaggtggtgtgaat
ggtgttctttcttgtgagaacacagctactgatccggatcagcctgtgcaaagaagtata
ccttctcttactgttcaagagattgttaatcgtgtaacagtgaatcccggagatccatgt
atccttgagacacaagagccgcttcaagatttagttcggggagttctgaaaattttctca
tcaaaaacagcgcctttgggggcaaaaggttggaaggcacttgttgcctatgaaaagtcc
acaaaaagttggtattgggttggtccaattatgcatagctcaaatgatcatgaaacaatt
gaggaggtgacgtcacctgaagcctggagtcttcctcacaaaatgcttgtcaagctggtt
gattcttttgcaaattggctaaaaaatggtcaagagactctccaacaaatagggagtctt
cctgcaccaccgcttgaattgatgcaagtaaatttagatgagaaagaaaggttcagagac
ctaagagcacagaaaagccttaataccattagcccaagttccgaagaagtgagagcttat
ttccgtagagaggagcttcttaggtattctattcctgacagggccttctcttacacagct
gctgatggcaaaaaatcaatagttgctcctttgagaaggggtggaggtaaaccgacttca
aaggctcgagatcattttatgctgaaacgtgataggccaccacatgttacaattctttgt
cttgtgagagatgctgcttccagattgcccggaagtattggcacccgtgcagatgtttgt
actttgataagagactctcaatacattgttgaagaagtttctgatgcacaagttaaccag
attgttagtggggctttagaccgtttacattatgaacgtgatccttgtgtacaattcgat
ggagaaaggaaattgtgggtttatttacacagagaaagagaagaagaagactttgaggat
gatggtacttcatctactaagaaatggaagaggcagaaaaaggatactgctgaacaatct
gatcaaggagctgtaattgcggcttttcatgcagccggggatcagttgggatttgatgat
gataaaaagatggagacagagtgtgaggatagacaaaatccggaggctaatgctgatgac
agtcatgcatcggaacaaggtcatccaataacaaggaatcctcttgacgcaaatcttgtc
caggaagacaaattgctatgtcaagaaaattctacaaacgaagaatttgatgataattga
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