Gossypium hirsutum (upland cotton): 107938442
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Entry
107938442 CDS
T04793
Name
(RefSeq) oligoribonuclease-like
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107938442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107938442
03009 Ribosome biogenesis [BR:
ghi03009
]
107938442
Messenger RNA biogenesis [BR:
ghi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
107938442
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
RNases
107938442
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
XPG_I_2
Motif
Other DBs
NCBI-GeneID:
107938442
NCBI-ProteinID:
XP_016727099
UniProt:
A0A1U8MNB8
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Position
A08:127319..129597
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AA seq
235 aa
AA seq
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MDRLSNAFSLLDIDVDDHHPPPASSSASKPSGKSKNNGKGPTELKPALLSENYKLPLVWI
DLEMTGLNIETDRILEIACIITDGYLTKSLEGPDLVIHQSKECLDRMGEWCQNHHAASGL
TKKVLQSTISEREAEKQVIEFVKRHVGTYTPHLAGNSVYMDFIFLKKYMPDLASLFSHVV
VDVSSVRALCIRWYPRDQKKAPAKEKKHRAMDDIRESISELKYFKETIFKAKSKK
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggataggctatcgaatgcgttttcgttgctggatattgatgtggacgatcatcatccc
ccaccggcttcatcatctgcttccaaaccttcaggtaagagcaaaaacaatgggaagggc
ccaactgaactgaaaccggcattgctttcggaaaactacaagttaccccttgtttggatt
gacttggaaatgactggtttgaatattgagactgatagaatattggagatagcttgtata
attacagatggctatctcaccaaatcattggagggtcctgatctggttatccatcaatct
aaagagtgtttagatagaatgggggaatggtgtcaaaatcatcatgcagctagtggattg
acaaagaaggtgctccaaagtacaattagtgaaagagaagctgaaaagcaggtcatagaa
tttgtaaagagacatgttggtacatacacacctcatttagctggaaattcagtttatatg
gattttatctttctgaagaaatatatgccagatttggctagccttttttctcatgtggta
gttgatgtaagcagtgtaagggctctttgcatacgctggtatccaagagatcaaaagaaa
gcccctgccaaagaaaagaaacacagagccatggatgatatcagagagagcatatccgaa
cttaaatacttcaaggagaccatatttaaagcaaaatccaagaagtga
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