KEGG   Gossypium hirsutum (upland cotton): 107938647
Entry
107938647         CDS       T04793                                 
Name
(RefSeq) AP-5 complex subunit zeta-1
  KO
K19025  AP-5 complex subunit zeta-1
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107938647
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AP-5 complex
     107938647
SSDB
Motif
Pfam: SPG48 TPR_AP5Z1_C GCIP_C
Other DBs
NCBI-GeneID: 107938647
NCBI-ProteinID: XP_016727359
UniProt: A0A1U8MP29
LinkDB
Position
D01:complement(9958498..9964224)
AA seq 570 aa
MSDQERDWDFYLRTVSNSARDSSFANDPASDPSLLHAVKKLCDFCRQEEKSSEDLVARVY
PHINKLFQRSTASLSQPTSPNGILLLVILQFFLDFGEVVLHDADPSLRTFFRSCLSREFA
DPVVAAATLDFLNVNKNKLLFSFPNLLPQFFPLLLKLIAWNGEKLEKAFLKVFPGLVSPG
SFLPLFPSLVDLPILVVALEKVERSSGSLIGSSIASIQKSAAPEMLLALMDEAYTGSTIG
DGGGDSESEESSTIDVADPVFLELLKDENDGLAERHWTSPGVAAVLQAATNSPQSDRLKQ
ILNITPRLLDMYFTIALRDANNSLICALIPILMARNSTLFPDKNYMYEVRRRLLEFMLAS
FQRSPDFIALLKKPIVDRLGEAYDSPEKTELALQLCWAVGEHGGGGGSHKDAARELFESL
ELLLYENLSSSRLGLRQESINSDSRNFRKSSQSRLLCFVITAIAKLATYHRELLPRARVA
LGKVARSRISDSRVWRRARDYLGLMDDPAICLSVLGPSRPSHGYPHNPGTVNWNDGGTKM
IAHIPFYILGEQEGPPFHDFSFPDILPRRR
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgagcgatcaagaacgagattgggatttctatcttcgaaccgtatcgaacagtgcaaga
gactcgagtttcgctaacgatccagcctccgatccttctcttcttcacgccgtcaagaaa
ctctgcgatttctgtagacaagaagagaaatcctctgaggatttggtcgctagggtttat
cctcatatcaacaagctcttccaacgctctactgcttccctctctcaacctacctctccc
aacggaattctcttactggtcattcttcaatttttccttgattttggagaggtggttctc
catgatgctgaccctagtctgaggacatttttccgttcatgtttgagccgtgagttcgca
gatcctgttgttgcagctgcaacccttgattttctaaatgtaaacaagaacaaacttctt
ttttctttccccaacttactgcctcagtttttccctttgcttctgaagctgattgcatgg
aacggagaaaaattagaaaaggcatttctcaaggtttttccaggattggtatcacctgga
tcatttctccccctatttccatctttagtagatttgccaatcttggttgtcgcattggaa
aaggtagaacgaagctcagggtcactaataggaagcagtatagcttctatccagaagagt
gcggctcctgagatgctacttgcactcatggatgaagcctatacgggttctaccattgga
gatggaggaggagactctgagtccgaggaaagcagtacgattgatgttgctgatcctgtg
tttctggaacttcttaaggatgaaaatgatggtcttgctgaacgccattggacttctcct
ggggttgctgcagtactacaagctgcaacaaatagccctcagtctgatagattaaagcag
atactcaatatcacacctcggcttcttgatatgtattttactatagctttgcgcgatgca
aataactcattaatctgtgcattaattcccattctgatggcaagaaattctacattattt
cctgacaagaactatatgtatgaggttcgtagaaggctcctagagttcatgcttgcttca
tttcagcgttctccagattttattgcacttttgaagaagcctatagttgacagacttggg
gaagcatatgacagcccagaaaagacagaattggcgttacaattgtgttgggctgtagga
gagcatggtgggggtggtggatctcacaaagatgcagctagggaactttttgaaagttta
gagctacttttgtatgaaaacctttcatctagtcgtctaggtctgaggcaggagtctatc
aactctgacagcaggaacttcagaaagtcatcacagtcgaggcttctgtgttttgttatc
acagctattgctaagcttgctacatatcaccgtgaactattgccgagggcacgtgtagcc
ttgggcaaggttgctcgatctcgaatatcagattcaagggtttggaggcgagctcgtgat
tatctgggattaatggatgaccctgctatctgtctgtctgtcttgggaccttccaggcct
tcacatgggtacccacacaatccaggcaccgtcaactggaatgatggaggcacaaaaatg
attgcgcatattccattttacattcttggtgagcaggaaggtccacccttccatgatttt
tcgtttccagatattcttccgagaagaagatag

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