Gossypium hirsutum (upland cotton): 107938647
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Entry
107938647 CDS
T04793
Name
(RefSeq) AP-5 complex subunit zeta-1
KO
K19025
AP-5 complex subunit zeta-1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107938647
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
107938647
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Gene cluster
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
GCIP_C
Motif
Other DBs
NCBI-GeneID:
107938647
NCBI-ProteinID:
XP_016727359
UniProt:
A0A1U8MP29
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Position
D01:complement(9958498..9964224)
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AA seq
570 aa
AA seq
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MSDQERDWDFYLRTVSNSARDSSFANDPASDPSLLHAVKKLCDFCRQEEKSSEDLVARVY
PHINKLFQRSTASLSQPTSPNGILLLVILQFFLDFGEVVLHDADPSLRTFFRSCLSREFA
DPVVAAATLDFLNVNKNKLLFSFPNLLPQFFPLLLKLIAWNGEKLEKAFLKVFPGLVSPG
SFLPLFPSLVDLPILVVALEKVERSSGSLIGSSIASIQKSAAPEMLLALMDEAYTGSTIG
DGGGDSESEESSTIDVADPVFLELLKDENDGLAERHWTSPGVAAVLQAATNSPQSDRLKQ
ILNITPRLLDMYFTIALRDANNSLICALIPILMARNSTLFPDKNYMYEVRRRLLEFMLAS
FQRSPDFIALLKKPIVDRLGEAYDSPEKTELALQLCWAVGEHGGGGGSHKDAARELFESL
ELLLYENLSSSRLGLRQESINSDSRNFRKSSQSRLLCFVITAIAKLATYHRELLPRARVA
LGKVARSRISDSRVWRRARDYLGLMDDPAICLSVLGPSRPSHGYPHNPGTVNWNDGGTKM
IAHIPFYILGEQEGPPFHDFSFPDILPRRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcaagaacgagattgggatttctatcttcgaaccgtatcgaacagtgcaaga
gactcgagtttcgctaacgatccagcctccgatccttctcttcttcacgccgtcaagaaa
ctctgcgatttctgtagacaagaagagaaatcctctgaggatttggtcgctagggtttat
cctcatatcaacaagctcttccaacgctctactgcttccctctctcaacctacctctccc
aacggaattctcttactggtcattcttcaatttttccttgattttggagaggtggttctc
catgatgctgaccctagtctgaggacatttttccgttcatgtttgagccgtgagttcgca
gatcctgttgttgcagctgcaacccttgattttctaaatgtaaacaagaacaaacttctt
ttttctttccccaacttactgcctcagtttttccctttgcttctgaagctgattgcatgg
aacggagaaaaattagaaaaggcatttctcaaggtttttccaggattggtatcacctgga
tcatttctccccctatttccatctttagtagatttgccaatcttggttgtcgcattggaa
aaggtagaacgaagctcagggtcactaataggaagcagtatagcttctatccagaagagt
gcggctcctgagatgctacttgcactcatggatgaagcctatacgggttctaccattgga
gatggaggaggagactctgagtccgaggaaagcagtacgattgatgttgctgatcctgtg
tttctggaacttcttaaggatgaaaatgatggtcttgctgaacgccattggacttctcct
ggggttgctgcagtactacaagctgcaacaaatagccctcagtctgatagattaaagcag
atactcaatatcacacctcggcttcttgatatgtattttactatagctttgcgcgatgca
aataactcattaatctgtgcattaattcccattctgatggcaagaaattctacattattt
cctgacaagaactatatgtatgaggttcgtagaaggctcctagagttcatgcttgcttca
tttcagcgttctccagattttattgcacttttgaagaagcctatagttgacagacttggg
gaagcatatgacagcccagaaaagacagaattggcgttacaattgtgttgggctgtagga
gagcatggtgggggtggtggatctcacaaagatgcagctagggaactttttgaaagttta
gagctacttttgtatgaaaacctttcatctagtcgtctaggtctgaggcaggagtctatc
aactctgacagcaggaacttcagaaagtcatcacagtcgaggcttctgtgttttgttatc
acagctattgctaagcttgctacatatcaccgtgaactattgccgagggcacgtgtagcc
ttgggcaaggttgctcgatctcgaatatcagattcaagggtttggaggcgagctcgtgat
tatctgggattaatggatgaccctgctatctgtctgtctgtcttgggaccttccaggcct
tcacatgggtacccacacaatccaggcaccgtcaactggaatgatggaggcacaaaaatg
attgcgcatattccattttacattcttggtgagcaggaaggtccacccttccatgatttt
tcgtttccagatattcttccgagaagaagatag
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