Gossypium hirsutum (upland cotton): 107938814
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Entry
107938814 CDS
T04793
Name
(RefSeq) 26S proteasome regulatory subunit 8 homolog A
KO
K03066
26S proteasome regulatory subunit T6
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
107938814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ghi03051
]
107938814
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
107938814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_16
nSTAND3
AAA_lid_PRS2_C
AAA_22
PRS7_OB
RuvB_N
TIP49
AAA_28
NPHP3_N
AAA_3
AAA_33
AAA_18
Mg_chelatase
AAA_14
PhoH
ABC_tran
Parvo_NS1
ATPase
AAA_24
AAA_17
RNA_helicase
IstB_IS21
DUF815
OapC
AAA_19
AAA_7
AAA_11
AAA_25
TsaE
Sigma54_activat
bpMoxR
Zeta_toxin
RsgA_GTPase
DUF5906
DUF4763
Motif
Other DBs
NCBI-GeneID:
107938814
NCBI-ProteinID:
XP_016727547
UniProt:
A0A1U8ML42
LinkDB
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Position
A13:107478846..107482963
Genome browser
AA seq
417 aa
AA seq
DB search
MATVSVERKQPATAEEMCTAKSGAKQGEGLRQYYLQHIHELQLNLRQKTHNLNRLEAQRN
ELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITP
STRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIK
HPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRM
VRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKI
KVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRQDILKIHSRRMNLMRGIDLKKIAE
KMNGASGAELKAVCTEAGMFALRERRVHVTQEDFEMAVAKVMKKETEKNMSLRKLWK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtgagtgtcgagaggaagcaaccggcaacggcggaagagatgtgcactgcc
aagagcggcgccaagcaaggggaaggcctccgccaatactatctccaacacatccacgag
ctccagctcaacctccgccaaaaaacccacaatctcaatcgtctcgaagcccagcgcaat
gagctcaattctcgagtgagaatgcttagagaggaactgcagctgcttcaagagcctgga
tcctatgttggtgaggtcgtgaaagttatgggtaaaaacaaagttctagtcaaggttcat
cctgaaggaaaatatgttgtcgatattgataagagtattgatatcacaaaaatcacgcca
tcaacaagagttgctcttcgcaatgacagctatgtcttgcatctgatcttaccaagcaaa
gttgatcccttggttaatcttatgaaagttgaaaaagttccagattctacatatgacatg
attggtgggcttgaccagcaaattaaagagataaaagaggtcatagaacttcctattaaa
catcctgaattgtttgaaagtcttggaatagcccagcccaagggtgttctgctgtatgga
ccacctggtacaggaaaaactctgttggctagagctgtggcccatcatactgattgtact
ttcatcagggtttctggttctgaattagttcagaaatacattggtgaaggctctcgaatg
gttagagagcttttcgtcatggccagggagcatgctccatcaatcatatttatggatgag
atagacagtatcggatctgctcgaatggaatctggaagtggcaatggtgacagtgaggtg
cagaggaccatgttggagcttctcaaccagctggatggatttgaagcatctaacaagatc
aaggttctgatggctacaaatcgaattgatatcttggatcaagctcttcttaggccaggc
cgaattgacaggaagattgaatttccaaacccgaacgaggagtctcgtcaggacatctta
aaaatacattctagaagaatgaatttgatgcgggggattgacctaaagaagattgctgag
aagatgaatggtgcttctggtgcggagcttaaggcggtttgcacagaagcagggatgttt
gctttgagggaaaggagggtccacgtaacacaggaagattttgagatggcagtggcgaag
gtgatgaagaaggagactgagaaaaacatgtccttacgaaagctgtggaagtga
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