Gossypium hirsutum (upland cotton): 107939032
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Entry
107939032 CDS
T04793
Name
(RefSeq) auxin response factor 6 isoform X1
KO
K14486
auxin response factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107939032
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
SIS_2
Motif
Other DBs
NCBI-GeneID:
107939032
NCBI-ProteinID:
XP_016727807
UniProt:
A0A1U8MLV3
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Position
D09:complement(1917768..1925440)
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AA seq
905 aa
AA seq
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MRLSSSGLNQQTQEGEKKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKE
VDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDVYLLPAELGAP
SRQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKF
RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSV
LSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAISHTRVSVGMRFR
MLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPL
TTFPMYPSPFPLRLKRPWPSILPSFYAFKDGDMSINSQLMWLQGGVGDQGLQSLNFQGFG
VAPWMQPRLDTSSIPGVQPDLYQAMVTAALQDMRTVDSSKIGSQSLLQCQQNQSTSTGSP
ALVQRQMLQQSQTQNGFLPSFLENQTASQVQLLQQLQCPNLYNDQRQKQQQQRQSQETQQ
LPPVPQQISNVIPAFPSVSANQAQSSLPAVDSQCQQSTFSDHLGNSIATSDVSSMQSILG
SLSQMGASHLLNLNGSNPILSSSTFLSKPAAIEPQLSSRVANSVLPQVEQLGTAQSNASE
LHNLLPPFPGREYSAYHNATDPQNNLLFGVSIDSSSLMLHHGMTNPKSIRNENDSMSLPY
AASNFTSASGTDFPLNSDMTASSCVDESGYLQSSENVDQVNPPTGTFVKVHKSGSFGRSL
DISKFGSYDELRCELARLFGLEGQLEDPQRSGWQLVFVDRENDILLLGDDPWQEFVNNVW
YIKILSPLEVQQMGKGQNPATSIPNQRLNATTTATTSSSNGNHCGDYMSRQDLRSSVASM
GSLEY
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgagactctcttcatcagggttgaatcagcaaacacaggaaggggagaagaaatgtttg
aattctgaactttggcatgcatgtgctggtcctttggtttctcttccacctgttggaagc
cgagttgtttactttccacaaggtcatagtgaacaggttgctgcttctactaacaaggaa
gtagatgctcatataccgaactatccgagcttacccccacaacttatctgtcagcttcac
aatgtgaccatgcatgcagatgtggaaacagatgaagtgtatgctcaaatgaccttgcag
ccactgagtccacaagagcaaaaggatgtctacctactgcctgcagaactaggtgctccc
agcagacagccaaccaattatttttgtaaaacactaacagcaagtgacactagcactcat
ggaggattctctgttcctcgccgtgctgctgagaaagtctttcctcctcttgactacacc
cagcaaccaccagctcaagagttgattgccagggatcttcatgacaatgagtggaaattt
agacatatatttcgaggtcagccaaagaggcatcttcttacaactgggtggagtgttttt
gtaagtgcaaagagactagttgctggtgactcagtcctttttatctggaatgataagaat
caattgttgttgggtatacggagagcaaaccgtcctcagactgttatgccttcttctgtt
ttatctagtgatagcatgcacattggtcttcttgctgctgcagctcatgcggctgcaacc
aatagccgttttactatattttacaacccaagggctagtccttcagagtttgtcattcct
cttgccaagtatgttaaagctatctctcacacccgggtttctgtaggcatgcgatttaga
atgctgtttgagacagaagagtcaagtgtccgacgatacatgggtacaataactggcatt
agtgacttagatcctgttcgctggccaaattcgcattggcgctctgttaaggttggctgg
gatgaatctactgcaggagagaggcagccaagagtttccttgtgggagattgaaccgtta
acaaccttccctatgtatccatctcccttccccctgcggctgaagcgaccatggccgtct
atactaccctccttctatgctttcaaagatggtgatatgagcattaattcccaattgatg
tggcttcaaggtggggttggggatcaaggacttcagtctttaaacttccaaggatttgga
gttgcaccttggatgcaaccaaggcttgatacttcttcaataccaggtgtccaacctgat
ctttaccaagcaatggtgactgcagcacttcaggatatgaggacggttgattcctccaaa
ataggctctcaatctctcttgcaatgccagcaaaaccagagcacatccactgggtcgcct
gctctagttcagaggcaaatgttacaacagtcccaaacacaaaatgggtttcttccaagt
tttcttgagaatcagactgcttcacaggttcaacttctgcagcagttgcagtgccccaat
ttgtacaatgaccagcgacagaagcagcagcagcagcgacagtctcaagaaacacagcaa
ctgccacctgttccgcagcagatttctaatgtaatccctgcttttccttctgtgtcagcc
aaccaagcgcagtcatctctgccagctgttgattcacaatgccagcagtcgacattttcc
gaccatcttgggaactccatagctacatctgatgtttcttctatgcaaagtatcttaggt
tcattatcccagatgggagcttcccatttactcaacttgaatggatcaaacccaatcctc
tcttcttctactttcttgtccaagcctgcagctattgaaccacagctttcatccagagtg
gccaactctgtacttccccaggttgaacagttgggaactgcacaatcaaatgcatctgaa
cttcacaacttattacctccatttcctggaagggagtattctgcttaccacaatgcaact
gatccacagaacaatcttctctttggggttagcattgattcttcgtctcttatgctgcat
catgggatgacaaacccgaaaagcatcagaaatgaaaatgattcaatgtcccttccgtac
gctgcttcaaatttcacaagtgcttctggcacagattttcctcttaattcagacatgact
gcctcaagttgtgtcgatgaatcaggttacttgcagtcctctgaaaatgtggaccaagta
aaccctccaactggaacctttgtcaaggttcacaagtcggggtcctttgggcgctcattg
gatatttccaagtttggcagctatgatgagctgcgctgtgagcttgctcgactatttggc
cttgaaggccaattagaggaccctcagagatcaggctggcagcttgtatttgttgacagg
gagaacgatattcttctccttggtgatgacccatggcaggaattcgtgaacaatgtgtgg
tatatcaagatactatccccacttgaagtacagcaaatggggaaaggtcagaatcctgct
acttctattccgaaccaaaggcttaacgccaccaccaccgctaccaccagcagcagcaat
ggcaaccactgcggtgactacatgagcagacaggacttgagaagttctgttgcatcaatg
gggtctcttgaatactaa
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