Gossypium hirsutum (upland cotton): 107939074
Help
Entry
107939074 CDS
T04793
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107939074
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
107939074
REST complex
107939074
Heterochromatin formation proteins
Other heterochromatin formation proteins
107939074
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
Sin3_corepress
PAH
Motif
Other DBs
NCBI-GeneID:
107939074
NCBI-ProteinID:
XP_040947833
UniProt:
A0ABM3A152
LinkDB
All DBs
Position
D04:9169609..9178278
Genome browser
AA seq
1107 aa
AA seq
DB search
MTSHADRGLSVDRPELDDDKDILKMQKDQRKRVEKDSRDRRTREHDDPEHDNNRDFNLQR
FPDKKRLGRKIEGFASNDERETFKSMCNQGFIFCEKVKERLCSSDDHQAFLKCLNIYSYG
IIKRNDLQNLVTDLLGKHPDLMNEFNQFLECCENTDGLLAGVISKKSLSGNGHTSRPVKI
EEKDREQRREMEGPKEKERYREYLAKSIQELDLSNCQSCTPSYRLLPDDYPIPSASQRSA
LGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSSTAKRAED
LLNSINENKINMDSPIRVQEYFTVLNLRCIERLYGDHGLDVMEILHKNPALALPVVLTRL
KQKQEEWTKCRSDFNKVWAEIYSKNHYKSLDHRSFYFKQQDSKNLSVKSLVAEIKELKEK
NQKEDDVLVASVAGHRQPLAPHLNYEYLDVDIHEDLYKLIEYSCEEMCSTKEQLSKVMRL
WTTFVEPMSGIPPRPNGKEGTDDAGKAQNPAVNCVTSSIAESGGSPRADTTVNSTQQKAA
TDRDENGSPELTNSCRNGLANGETSAKEHSSHLSRDDLKKNTQPGINMLAIGALAFEAEN
NHSKSNTEGASASRPSSVAAGEDLEPEANADLLHTSEGGDVTKHALLVNGVPTDETNASR
YLEEPAGPLKIEKEEGELSPNGDFEEDNFVAHGDNGLKAVPVAKHSVESGQYQSGKGSHC
KDAGVENGADADDEDSENASEAGDDASGSESADDECSRGEHEEEEVELDEVDGKAESEGE
AEGMNGMHAGGDGMSVSTSEQFLFTVKPLAKHVPAVFPEEDQNISWVFYANDDFYVLFRF
HQILYERILSAKTNSTGAELKRKNSKELCSSDLYARFMSALYSLLDGSSDNMKFEDECRA
IIGNQSYVLFTLDKLIYKLVKQLQAVATDEMDNKLLQLFEYEKSRKHARTMDSVYYENAR
VLLHEENIYRLKCSSSPSRLSIQLMDNVIEKPEAFAVSMEPNFSAFLHNDFLSVFPGKKE
PHGVTLKRNKKKYANLDEFAAICMAMEGVELVNGLENKIACNSYKISYVLDTEDFFCRRR
RNSPPKCGSYNTQARLQRFHKFLSASQ
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccatgctgacagaggtctcagtgttgatcgtcctgaactggatgatgataaa
gatatcctgaaaatgcaaaaagaccagagaaagcgtgtggaaaaggacagtagggatcgg
agaactcgtgaacatgatgatcctgagcatgacaacaacagggattttaacttgcagcga
tttcctgacaaaaagagattgggaaggaagattgaaggatttgcttccaatgatgagaga
gagacttttaaaagcatgtgcaaccaagggttcatattctgtgagaaagttaaggagagg
ctatgcagttctgatgaccaccaggcattcttaaagtgccttaatatttatagctatgga
ataataaaaagaaatgatttgcaaaatttggtgactgatttacttggcaagcatccagat
cttatgaatgagttcaaccagttcttggagtgttgtgagaatactgacgggcttcttgct
ggtgttattagtaaaaaatcacttagtggaaatggacatacgtccaggccagtgaagata
gaggaaaaagatagagaacagaggcgtgaaatggaggggcctaaggaaaaggagagatac
agggagtatctggcaaaatccatacaggaacttgacctttccaactgccaaagttgtacc
ccaagctatcggcttctgcctgatgattatccaataccttcggcaagtcaaagatcagcg
cttggcgctcaagtgctgaatgatcactgggtatctgtgacttcaggaagtgaggattat
tcttttaagcacatgcgccgaaatcagtatgaagagagcttattcagatgtgaggatgat
agatttgaactggatatgttgctagaatctgtgagttcaactgccaagcgtgccgaggac
cttctgaacagcattaatgaaaataaaatcaatatggattctccaattcgtgtacaagaa
tactttactgttctaaatttgaggtgcattgagcgtttatatggtgaccatggtcttgat
gtaatggaaatattacataaaaaccctgctcttgcattgcctgtcgttttaactcgcctg
aagcagaagcaagaagagtggacaaagtgccgttctgactttaacaaagtttgggctgaa
atttattcaaaaaaccattataaatcacttgatcatcgcagcttctatttcaagcagcag
gattcaaagaacttgagtgtaaaatctttagtggctgaaatcaaggagttgaaagagaag
aaccagaaagaggatgacgttcttgtggctagtgttgctggtcacagacaacccttagct
ccacacctcaactatgaatatttggatgttgacattcatgaagacctatataaacttata
gaatattcatgtgaagagatgtgctcgactaaagaacagttaagtaaagtaatgaggctc
tggaccactttcgtggagccaatgtcgggcattcctcctcgacctaatggcaaagagggt
actgatgatgctggtaaagctcagaatcctgctgtaaactgcgttacgtcaagcattgct
gaaagtggtggaagtcccagagctgatactactgttaattccacacaacaaaaggctgcc
actgacagagatgagaatggttcacctgaattaactaattcctgcagaaatggtttggca
aatggggaaacttcagccaaagaacactcaagtcatttatctagagatgatttaaagaag
aacactcaacctggaataaacatgctggcaattggagcccttgcatttgaagccgaaaat
aatcacagcaaaagcaatactgaaggggcttcagcatctagacctagcagcgttgcagct
ggtgaggatcttgaacctgaagctaatgcagatcttctgcacacatcagagggtggtgat
gtaacaaaacatgctctattagttaatggagtgcctacagatgagactaatgctagtaga
tatcttgaagaacctgctggtcccttgaaaattgagaaagaagaaggtgaattatcacct
aatggtgattttgaggaggataattttgttgctcatggtgataatggcctaaaggctgtt
ccagtggcgaagcatagtgttgaaagtggacagtatcagtctggaaaagggtcacattgt
aaggatgctggagttgaaaatggtgcagatgctgatgatgaggatagtgaaaatgcctct
gaggctggtgatgatgcatcaggcagtgagtctgcagatgatgaatgctcccgtggagag
cacgaagaggaagaggttgagcttgatgaagttgatggtaaggccgagagcgaaggtgaa
gctgaagggatgaatggtatgcatgcaggaggagatggcatgtctgtgtcaacttccgaa
cagtttctttttacggtgaagcctcttgcaaaacacgtacctgcagtttttcctgaagaa
gatcaaaacatttcttgggttttttatgcaaatgatgatttctatgttcttttcagattt
catcaaatcctatatgaaagaatactgtctgcgaaaacaaactcaacaggtgctgagtta
aagcggaaaaactcaaaagaattgtgttcttcagatttatatgccagatttatgagtgca
ctgtacagtctacttgatggatcttctgacaatatgaagtttgaagatgaatgtcgagca
ataataggaaaccagtcatacgtattattcacattggacaagttaatatataaattggtt
aagcagcttcaagctgttgcaacagatgagatggataataagcttcttcaactgtttgag
tatgaaaaatcccggaaacatgcaaggacaatggattcagtgtattacgaaaatgcacgt
gtcctccttcatgaggagaatatttatcgattgaaatgctcatcttctccatctcgatta
tctattcagctgatggacaatgtgattgaaaaacctgaggcttttgctgtttcaatggaa
cctaatttttcagcttttttgcacaatgattttctatcagtctttcctgggaaaaaggaa
ccacatggtgttacgctaaagagaaacaagaaaaaatatgcaaacctagatgaatttgct
gccatttgcatggctatggaaggtgttgaactggttaatggcttagagaacaagatagct
tgcaattcatacaagatttcttatgtgttggacaccgaagatttcttctgtcgtaggaga
agaaattcgccaccaaaatgcggatcatataatactcaggcaagactacaacggttccat
aaatttttatcggcttcccaataa
DBGET
integrated database retrieval system
