KEGG   Gossypium hirsutum (upland cotton): 107939125
Entry
107939125         CDS       T04793                                 
Name
(RefSeq) RING-H2 finger protein ATL73-like
  KO
K19040  E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107939125
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107939125
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    107939125
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 Prok-RING_1 zf-ANAPC11 zf-RING_5 zf-RING_UBOX zf-RING_16 zf-C3HC4_3 Zn_ribbon_IFT122_C Jiraiya zf-RING-like zf-RING_4 zf_RING_Vps8_fungal DUF6535 RINGv HemY_N FANCL_C
Other DBs
NCBI-GeneID: 107939125
NCBI-ProteinID: XP_016727895
UniProt: A0A1U8MM57
LinkDB
Position
A12:complement(9794507..9795750)
AA seq 167 aa
MLQFLPLLPYVSMAQTSPSPSAGTPSQETQEPTVDLNLMIIVAALLCALVCVLGLHSMLQ
CVLQCTHRTLTEPREWVASRRLNSGLKKKEMVALPTLTYANSGSPSSASGCAICLADFSK
GDKIRMLPKCNHGFHVACIDKWLLSHSSCPTCRYRLNSNNDQIVTDF
NT seq 504 nt   +upstreamnt  +downstreamnt
atgcttcagtttctcccacttcttccatatgtctccatggcccaaacttcaccatctccc
tctgctggtactcccagtcaggagacacaagaacccacagtagacttgaacctcatgatc
atcgtggcagccttgttgtgtgccttggtttgtgtcttaggtcttcactccatgctacaa
tgcgtattacaatgcacccatcgtaccctgaccgagccaagggaatgggtggcctcccgt
agactgaactcgggtcttaagaagaaagaaatggtagctttaccaactttgacctatgca
aattcagggtcaccgtcatcagcttcaggttgcgcaatttgccttgcggatttctcgaaa
ggtgacaaaatacggatgcttcccaaatgcaaccatggtttccacgttgcgtgcatcgat
aaatggctgctctctcactcttcctgtcctacttgccggtataggctcaactccaataac
gaccaaattgttacagacttttaa

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