Gossypium hirsutum (upland cotton): 107939190
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Entry
107939190 CDS
T04793
Name
(RefSeq) E3 SUMO-protein ligase MMS21-like
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107939190
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107939190
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107939190
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
107939190
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
zf-RING_UBOX
zf-MIZ
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
107939190
NCBI-ProteinID:
XP_016727969
UniProt:
A0A1U8MR22
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Position
D01:complement(6565032..6568999)
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AA seq
256 aa
AA seq
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MASTSASRSDGVSSRIRRAASTVNSDNQLLVSDIRKAMNLMKDIAVDLERDNQSDMVKQL
ENAVAELVEAHENCLHYSSAIHSVADAYRPGPELTDFKKLLDTEFEKVKAGSSSHPQNHP
LMHQFQQAVWNVHHAGQPMPGEEQEDIIMTSTESSIKNLKCPLTGKHITELTEPVRSMDC
KHIYEKNAILIYIKSHHNNAKCPESACPKMVHAKRVICDPLLLVEIEEQCTLSRQTARTD
VVEDFTEMEPHDEDST
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgtcggcatctcggtctgatggcgtttcttccagaatcagacgcgcggct
tccactgttaactctgacaatcaattgcttgtatccgatataaggaaagctatgaatttg
atgaaggacatcgctgtagacttggagagagataatcaatctgacatggtgaagcagcta
gaaaatgctgttgctgagctggtagaagctcatgaaaactgtctacattattcatcagca
attcattctgttgcagacgcataccgaccagggcctgagttaactgattttaagaagttg
cttgacaccgagtttgaaaaagtcaaagctggttcatcttcacatccacaaaatcatcca
ctgatgcatcagttccagcaagctgtctggaacgttcatcatgctggacaaccaatgcca
ggtgaagagcaggaggatattattatgaccagtacagagagcagtattaagaatcttaaa
tgtccattgactggaaagcatattactgaactaacagaaccagttcgcagcatggactgc
aagcacatttacgaaaagaatgctatcctgatctacataaaatctcatcataacaatgcc
aaatgccccgaatcagcttgccctaagatggtgcatgcaaaaagagttatttgcgatcca
ttgttactcgttgagatagaggagcaatgcacattgagtagacagactgctagaactgat
gtggtagaagatttcacagaaatggagcctcatgatgaagatagtacgtga
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