Gossypium hirsutum (upland cotton): 107939292
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Entry
107939292 CDS
T04793
Name
(RefSeq) transcription factor MYB98-like
KO
K09422
transcription factor MYB, plant
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107939292
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
107939292
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SLIDE
DUF4211
DUF2240
HTH_CHD1_Hrp3
SNAPC2
Motif
Other DBs
NCBI-GeneID:
107939292
NCBI-ProteinID:
XP_016728091
UniProt:
A0A1U8MMN0
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Position
A12:109201919..109203764
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AA seq
449 aa
AA seq
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MAKRYFTLVLVSIASSMEFDPKLRENMSPQHQHHPMMLSENNILKPLQTTTPLSSSSSKG
YYLQDFHHLDDDDDDQIQVNVSSSSWNPVFGVNAACYDPFDAFPYGCSTNRVDFYECKPF
AADHNTGNLRHGHVMDKFQSSVGLLNLRNTISNDVIMMGSDVGYLPSFEFPNLGDEVSCV
TAENGYRVLVDSTSSRIRTNWKGRKKTNGVKGQWTMEEDRMLIQLVEQYGVRKWSHIAQM
LPGRIGKQCRERWHNHLRPDIKKDTWSEEEDKVLIQAHIEIGNKWAEIAKRLPGRTENSI
KNHWNATKRRQFSKRKCRSKYPRGSILQEYIKSLNLDSTAAAAARSHEKASDGAAVKAAD
NKSSSIKQPQGLEIGPSTDRLVPEYEYDEVHEFSFDEKLLQESCSIELLLDQIPSTAATA
DEKSFQMEDMGAVKNEMDLVEMISAHPNI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaggtactttactttggtcctggtttcgattgcatcatcaatggagtttgat
ccaaagcttagagaaaacatgtcccctcaacaccagcatcatcctatgatgttgtctgaa
aacaacatactaaaaccactccaaaccaccactccattatcatcatcatcatcaaagggt
tattatttacaggacttccaccaccttgatgatgatgatgatgatcagatccaagtcaat
gtatcatcgtcgtcttggaaccctgttttcggtgtcaatgctgcttgttatgatcctttc
gatgccttcccttacggttgttccaccaaccgtgttgatttttacgagtgtaagcctttt
gcagcagatcataacactggtaatttaagacatggacatgttatggacaagttccagagt
agcgtggggttgttgaaccttaggaacacaatatctaatgatgttattatgatggggtcg
gatgttggttacctgccctcctttgaatttccaaaccttggggatgaagtgtcgtgtgtg
actgctgaaaatggttatagggtattggttgattcaaccagttctagaattaggacaaac
tggaaaggtcgtaagaagacaaatggagtgaagggacaatggacaatggaagaagacagg
atgttgattcagttagtagaacaatatggagtgagaaaatggtctcatattgcacaaatg
ttgcctggaagaatagggaagcaatgcagagagagatggcacaaccatttaaggcctgac
atcaagaaggacacatggagtgaagaggaagacaaggtcctaatacaggcacacatagag
ataggaaacaaatgggcagaaattgcaaagaggttaccaggaagaacagaaaactccatc
aaaaaccactggaatgcaaccaaaagaaggcaattttcaaagagaaaatgtcggtccaag
tacccaaggggctccatcttgcaagaatacatcaaaagcttgaacttagattccaccgcc
gccgccgccgcgagatcacatgaaaaagcttcagatggtgccgctgtaaaggcggcggat
aataaaagttcaagcattaagcagcctcaaggtttagaaatcggccctagcactgatcgt
ttagtgccagaatatgaatatgatgaggttcatgaattttcattcgatgagaaactgctt
caagagagctgcagcattgagttgctgcttgatcaaatacccagtactgctgccacggct
gatgaaaaaagctttcaaatggaagatatgggagcagtcaagaacgagatggatttggtg
gagatgatctctgctcaccctaatatctaa
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