Gossypium hirsutum (upland cotton): 107939360
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Entry
107939360 CDS
T04793
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 homolog A
KO
K03032
26S proteasome regulatory subunit N2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
107939360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ghi03051
]
107939360
Proteasome [BR:
ghi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
107939360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
107939360
NCBI-ProteinID:
XP_016728180
UniProt:
A0A1U8MMY0
LinkDB
All DBs
Position
A02:complement(3072596..3079092)
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AA seq
1009 aa
AA seq
DB search
MAASAATMVSSAGGLLAMLNESHPQLKLHALTNLIGFVDQFWPEISTSVPIIESLYEDEE
FGQHQRQLSALLVSKVFYYLGELNDSLSYALGAGPLFDVSEDSDYVHTLLAKAIDEYASF
RSKAAESSDEAAKVDPRLEEIVERMLDKCIMDRKYQQAMGIAVECRRLDKLEEAITKSEN
VHAILAYCTHVSHSFVYRREYRHEVLRLLVKVYQKLPSPDYLSTSQCLMFLDEPEGVANI
LEKLLRSENKEDALLAFQVAFDLVENEHQAFLLNVRDRLSAPKSLPSEPVQPGSTNPSPA
ENENSTASEDVQMTDGSSAITTNVHEADPKEVTYAERLMKVKGILSGETSIQLTLQFLYS
HNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVDTFLRDNLDWLSRATNWAKF
SATAGLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSEGGALYALGLIHANHGEGIKQF
LRDSLRNTNVEVIQHGACLGLGLAALGTADEEIYEDIKSVLYTDSAVAGEAAGISIGLLM
VGTASEKASEMLAYAHETQHEKIIRGLALGIALTVYGREEEADTLIEQMTRDQDPIIRYG
GMYALALAYRGTANNKAIRQLLHFAVSDVSDDVRRTAVLALGFVLYSEPEQTPRIVSLLS
ESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIAMAMVMIQINEA
SDSRVGTFRRQLEKIILDKHEDTMSKMGAILASGILDAGGRNVTIRLLSKTKHDKITAVV
GLAVFSQFWYWYPLIYFVSLSFSPTAFIGLNYDLKVPRFEFLSHAKPSLFEYPKPTTVPT
TTSAVKLPTAVLSTSAKAKARAKKEAEQKAIAEKSSGAESSSSASITGKGKSSSEKDGEA
MQVDGPPEKKAEPEPSFEILTNPARVVPAQEKFIKFLEDSRYAPVKLAPSGFVLLRDLRP
DEPEALSLTDAPALAASPAAGSAAGQQSSSLAMAVDDEPQPPQPFEFTS
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatcagcggcgacgatggtcagctcggctggtggcttattagcgatgcttaac
gagagccatcctcagttgaaattacatgctctcactaatttaattgggttcgttgatcaa
ttttggcccgagatctccaccagcgttcctataatagaaagcctatatgaagatgaagaa
tttggccagcatcagagacaactttctgcgcttcttgtctcaaaggtgttttattacttg
ggtgaactcaatgattcgttgtcctatgctcttggagctggccctctttttgatgtttct
gaggattctgattatgtgcatactctccttgccaaggcaatagatgagtatgccagcttt
cggtcaaaggcagctgaatcaagtgatgaagctgcgaaggttgaccctaggttggaggag
attgtggagagaatgctggataagtgtattatggatagaaaataccaacaagcgatggga
attgcagttgagtgccggagactggataaacttgaggaagcaataacaaagagtgaaaat
gttcatgcaatcttagcatattgcactcatgtttctcattcttttgtatatcgccgagaa
tatcgtcatgaggtgcttcggcttcttgttaaagtgtaccaaaaactgccttctcctgat
tatttgagcacttctcagtgcctaatgttcttggatgaacctgaaggtgttgcaaatata
ttggagaaacttctccgttctgaaaataaggaggatgctcttttggctttccaagttgca
ttcgatcttgtggagaatgagcaccaggcttttctgttaaatgtaagagatcgcctttct
gctcccaaatctctaccttcagaaccagtacagccaggatccaccaacccttctccagct
gaaaatgaaaattctactgcttcagaggatgttcagatgacagatgggtcttctgctatt
actacaaacgttcatgaggcagatcctaaagaagttacttatgctgagaggttgatgaaa
gtcaaaggaattttgtctggagagacctcgatacagttgactctacaattcttgtacagt
cataacaaatcggatctattaattttgaagacaataaagcagtctgttgaaatgaggaat
agtgtttgtcacagcgctacaatctatgctaatgcaataatgcatgctggaacaactgtg
gatacattcctgagggacaatctggactggctgagtagagctaccaattgggctaaattc
agtgcaacagctgggcttggtgttattcacagaggacatcttcagcaaggcaggtctcta
atggctccatatttgccccagggtggggctggaggtggtgggagtccatattctgaaggt
ggggcattatatgctttgggtctcattcatgccaaccatggtgagggcatcaagcaattc
cttcgtgatagcctacgcaacactaatgttgaggttattcaacatggtgcatgcctagga
cttggtttggcagctctaggaactgctgatgaagaaatctatgaagacatcaaaagtgtg
ctttatactgacagtgctgttgccggtgaagctgctggcatcagtataggtttgctcatg
gttggaactgctagcgagaaggcaagcgagatgcttgcttatgcacatgagacacagcat
gaaaaaattatcaggggtttagcattagggattgctcttacagtatatggaagggaagaa
gaagcagacacattaattgagcagatgactcgggatcaagatcctattatccgttatggt
ggtatgtatgcattagcattggcctataggggaactgcaaacaataaggctattcgtcag
ctgctgcactttgctgtatcagatgtgagtgatgatgttaggagaactgctgttttagcg
ctggggtttgtcctttactcagagccggagcagactcctcgaattgtctccttactgtct
gagtcttacaaccctcatgttcgatatggtgcggcacttgcagtgggtatttcatgtgct
ggcactggattgagtgaggccatatcattgttagaacccttgacatcagatgttgttgat
tttgttcgccaaggtgctcttattgcgatggctatggtcatgattcagatcaatgaagca
agtgattctcgtgtcgggacattcaggcgtcaacttgaaaaaattatactggataagcat
gaagacacaatgagcaagatgggagcaatcttggcctctgggatccttgatgctggtgga
agaaatgtaaccataagattgctttccaagacaaagcatgacaaaatcacagcagttgtt
ggtcttgctgtttttagccagttttggtattggtatcccctcatttattttgtcagcttg
tcattttcacctacagcctttattggactgaactacgacctgaaagttccaaggttcgag
ttcttatcacatgcaaaaccttcgcttttcgagtatccaaaacctactactgttcccacc
acgacatcagcagtcaaacttccaactgctgttctgtcaacatcagcaaaggctaaagct
agggctaagaaagaggcggaacaaaaggcaattgctgagaaatcatctggggcagagtcc
tcatcttctgcttcaattactgggaaagggaaatcaagcagtgagaaggatggggaagct
atgcaggttgatggtcctcccgagaagaaagccgagccggagccatcatttgagattttg
accaacccagcaagagtggttcctgctcaggagaagttcattaagtttctagaagacagc
cgatatgcgcctgtgaagttggcaccatcagggtttgttcttcttagagacctgcgccct
gatgaaccggaggcactgtccctaacagatgcacctgcattagcagcatctccagcggct
ggatcagcagcaggtcaacagagttcctcattagctatggctgttgatgatgaacctcag
ccccctcagcctttcgagttcacatcctga
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