KEGG   Gossypium hirsutum (upland cotton): 107939536
Entry
107939536         CDS       T04793                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03083  Polycomb repressive complex
ghi04120  Ubiquitin mediated proteolysis
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107939536
   04120 Ubiquitin mediated proteolysis
    107939536
  09126 Chromosome
   03083 Polycomb repressive complex
    107939536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107939536
   04121 Ubiquitin system [BR:ghi04121]
    107939536
   03036 Chromosome and associated proteins [BR:ghi03036]
    107939536
Membrane trafficking [BR:ghi04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    107939536
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     107939536
   Cul7 complex
     107939536
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107939536
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     107939536
SSDB
Motif
Pfam: Skp1 Skp1_POZ Methyltransf_16 DUF3943
Other DBs
NCBI-GeneID: 107939536
NCBI-ProteinID: XP_016728371
UniProt: A0A1U8MNF5
LinkDB
Position
A12:complement(6377451..6378437)
AA seq 158 aa
MESTSKKVTLSSSDGRTFEVEEAVAFQSQTIKHLYETGCTGDFIPIPNVTGDILSMVIRY
CEKHVDSDTAAGKESFYSNKLKRWDALFVKVDQSTLFDLILAADFMNINSLMDLTCKTVA
NMMKGKTTEEIRGTFNIKNDYTLEAEEMVRRENQWAFE
NT seq 477 nt   +upstreamnt  +downstreamnt
atggaatcaacttcgaagaaggtaactttgagcagctccgacgggcggactttcgaggtg
gaggaagcggttgcattccagtctcagacgatcaaacacttgtacgaaacaggttgcacc
ggcgacttcatccctatccctaacgtcaccggcgacattttatccatggttatccggtac
tgcgagaagcacgtagattcggataccgccgctggcaaggaaagcttctacagtaacaaa
ctcaagcgctgggatgctctttttgtcaaggttgaccaaagcaccctcttcgacctcatc
ttggcggccgactttatgaatataaatagcttgatggacttgacatgcaaaactgttgcc
aacatgatgaaggggaagacaactgaggagattcgtggtaccttcaacatcaagaacgat
tacaccctcgaggcagaagagatggttaggagggagaaccaatgggcattcgaatga

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