Gossypium hirsutum (upland cotton): 107939536
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Entry
107939536 CDS
T04793
Name
(RefSeq) SKP1-like protein 1B
KO
K03094
S-phase kinase-associated protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03083
Polycomb repressive complex
ghi04120
Ubiquitin mediated proteolysis
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107939536
04120 Ubiquitin mediated proteolysis
107939536
09126 Chromosome
03083 Polycomb repressive complex
107939536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107939536
04121 Ubiquitin system [BR:
ghi04121
]
107939536
03036 Chromosome and associated proteins [BR:
ghi03036
]
107939536
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
107939536
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
107939536
Cul7 complex
107939536
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107939536
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
107939536
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Methyltransf_16
DUF3943
Motif
Other DBs
NCBI-GeneID:
107939536
NCBI-ProteinID:
XP_016728371
UniProt:
A0A1U8MNF5
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All DBs
Position
A12:complement(6377451..6378437)
Genome browser
AA seq
158 aa
AA seq
DB search
MESTSKKVTLSSSDGRTFEVEEAVAFQSQTIKHLYETGCTGDFIPIPNVTGDILSMVIRY
CEKHVDSDTAAGKESFYSNKLKRWDALFVKVDQSTLFDLILAADFMNINSLMDLTCKTVA
NMMKGKTTEEIRGTFNIKNDYTLEAEEMVRRENQWAFE
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaacttcgaagaaggtaactttgagcagctccgacgggcggactttcgaggtg
gaggaagcggttgcattccagtctcagacgatcaaacacttgtacgaaacaggttgcacc
ggcgacttcatccctatccctaacgtcaccggcgacattttatccatggttatccggtac
tgcgagaagcacgtagattcggataccgccgctggcaaggaaagcttctacagtaacaaa
ctcaagcgctgggatgctctttttgtcaaggttgaccaaagcaccctcttcgacctcatc
ttggcggccgactttatgaatataaatagcttgatggacttgacatgcaaaactgttgcc
aacatgatgaaggggaagacaactgaggagattcgtggtaccttcaacatcaagaacgat
tacaccctcgaggcagaagagatggttaggagggagaaccaatgggcattcgaatga
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integrated database retrieval system