Gossypium hirsutum (upland cotton): 107939668
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Entry
107939668 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/LRR-repeat protein 3
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107939668
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107939668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box-like
LRR_RPS2
F-box
Motif
Other DBs
NCBI-GeneID:
107939668
NCBI-ProteinID:
XP_040971971
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All DBs
Position
A01:complement(119547616..119550568)
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AA seq
666 aa
AA seq
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MKKQKPDNLKGFNPFNQLPQEIIFTILDLLNSNPLDIKSFSLACKSFYAAESKHRTSLKP
LRQEHLPSILSRYPNIAHLHLTRCSRVSDTCLSFVSHACASSLRSIDLSRTHLFSASGLL
GLALNCNNLVEIDLSNATELKDSAMAAVSQAKNLEKLWLARCKSVTDLGVGCVAVGCRKL
KSICLKWCXGVGDLGVGLLAVKCNHICYLDLSYLPITSKCLSPILKLQHLEDLALEGCFG
IDDDSLAVLKHGCNSLKSLDVSTCQNISHNGLSSLVSGAVGLQQLTLAHGSPVTSSLGDS
LKKFSMLQSVKLDGCLISYDGLKTIGNWCPSLRELSLSKCSGVTDEGLSSIVTRHKDLRK
LDITCCRKITDVSISRITNSCNSLTSLRMESCTLVSREAFVLIGQRCHLLEELDLTDNEI
DDKGLKYISRCSQLSNLKLGICLNITDEGLIHIGRGCSKLLELDLYRSVEITDSGIIAIA
QGCPGLEMINIAYCKDITDHSLLSLSKCSRLKTLESRGCSMITSLGLTAVAVGCKELTKL
DVKKCPNIDDAGMLPLTHFSQNLRQINLSHSSVTDIGLLSLAGISCLQNITILHLKSLTP
TGLAAVLLACGGLTKVKLQAEFKWLLPHRLIEHLEARGCTFQWRDKVLQVELDPKCWKLR
LEDLMP
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaaaaaccagacaaccttaaaggcttcaacccctttaatcagctgcctcaa
gagatcatcttcaccatcctcgacctccttaactccaatcctctcgacataaagtctttc
tctttagcttgcaagtctttctacgctgctgaatccaagcaccgtacctccctcaagccc
ctccgccaggaacacctcccttcaatcctttcccgctaccccaacatcgcccatctccat
ctcacgcgctgctcacgtgtctccgacacctgtctctcctttgtatcccatgcatgcgcc
tcctcgcttcgctccattgatttatccagaactcatctcttttccgcttctgggttgttg
ggcttggctttgaattgtaacaacttggttgagattgatttgtccaatgccacggagttg
aaagactcggctatggctgccgtttcccaagctaagaacttggaaaagctatggctcgcg
aggtgtaagtcggttacggatttgggggtgggatgtgttgctgttggatgcagaaaattg
aagtccatttgcttgaaatggtgcnttggggttggtgatttaggggttggtttgcttgct
gttaagtgcaaccacatttgctacttggatctttcttacttacctattacaagtaaatgt
ttatcacctatcttgaaattacaacatctagaagacttggcccttgaaggatgtttcggc
atcgatgatgacagccttgctgtcctcaaacatggatgcaattcattaaagagtcttgat
gtgtcaacttgtcagaatattagtcacaatggcttgtcttccctagtaagtggtgctgta
ggtctgcagcaacttaccttagcccatggttcacctgtaacctcttcccttggtgattct
ttgaaaaagttttctatgttgcaatctgttaaattggatggttgtctgattagctatgat
ggactgaaaactatcggaaactggtgcccttcattaagggaattgagtttaagtaaatgc
tcaggagtaacagatgaaggcctctcgtccattgtaacaaggcataaagacctaaggaaa
ctagacattacgtgttgccgcaagataactgatgtctctatttcccgcatcacaaattcg
tgcaactctcttacttctctcaggatggagtcctgtaccctggtttctagagaagccttt
gttttgatcggccagcggtgtcatttgcttgaagagcttgaccttacagataatgaaatt
gatgataaaggtctgaagtacatatccagatgttcccaactatccaacttaaagctagga
atttgccttaatataactgatgagggacttatccatatcggcaggggctgctcaaaactt
ttagagcttgatttatacaggtctgtagaaataacagattcaggcattatagcaattgca
caaggttgccctggccttgaaatgattaatatagcttactgcaaagatattaccgatcat
tccttgctatctttatccaaatgctcacggttaaagacgcttgaaagtcgagggtgttct
atgataacatctttaggactaacagctgttgctgtgggatgcaaggaacttaccaagcta
gacgtaaagaagtgtcctaatattgatgatgcaggaatgcttccacttactcatttttct
caaaaccttcgacaaattaatttgtcccatagctcggttacggacataggattgttgtca
ctggctggcattagctgcctacagaacataacaattctgcacttaaaaagtttgactcct
actggactagccgctgtcttgctggcatgtggagggttgacaaaagtgaaacttcaggca
gagtttaaatggctgctaccccatcgacttattgaacatttggaagcacgcggttgtact
tttcaatggagagataaagtgcttcaggtggaattagatcccaagtgttggaaattacgg
ttggaagatctaatgccgtag
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