Gossypium hirsutum (upland cotton): 107939740
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Entry
107939740 CDS
T04793
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107939740
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107939740
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107939740
NCBI-ProteinID:
XP_016728600
UniProt:
A0A1U8MP73
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Position
A04:complement(2336488..2338774)
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AA seq
454 aa
AA seq
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MEVTKLRVVFLFSFFTLIPKLWANVAEFDDFWKQREEEAWKIALTAYEPSPENVTSHLNY
HVNKVLEKTMSNQPLEFKDVITNSTRRSLRGKHKKYTGPCMAINPIDRCWRCKKNWAKNR
KRLAKCVLGFGHKTRGGKKGEYYLVTDNSDDDVVNPKPGTLRHAVIQKRPLWIIFAHDMN
IKLSKELMVQSHKTIDGRGANVHMAYGCGITLQFVHNVIIHNIHIHRVVRSSGGLIRDSE
DHYGYRTVGDGDGISIFGSSKIWLDHISMSECQDGLIDAIQGSTAITISNCHFTHHDHVI
LLGASDTYSKDQYMQVTLAFNHFGKELIQRMPRCRWGYFHVVNNDYTHWKLYAIGGSTHP
TIISQGNRFIAPDDPLTKEITHRNYAPESEWRNWIWRSEGDRFMNGAFFVTSGPPSPPHL
KLKKKDIIKAKPAIFVGRLTKFSGTLKCKEGVKC
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaactaagctaagggttgttttcctcttttcttttttcaccttaattccaaag
ctatgggcaaatgttgctgaatttgatgatttttggaagcaacgtgaagaagaagcctgg
aagattgctctaacagcttatgaaccgagcccagaaaatgttaccagtcacctgaactat
catgttaacaaggttcttgaaaaaactatgtccaatcaacccttagaatttaaggatgtt
attactaatagcacgagaagatccttgaggggtaaacataagaagtataccggtccatgc
atggcgatcaatccaattgataggtgctggagatgcaagaagaactgggccaagaatcgc
aaaagactagctaagtgtgtccttggttttggccacaaaactcgtggagggaaaaaggga
gaatattatttggttaccgataattctgatgatgatgtcgtaaatcctaaaccaggaact
ttacgtcacgctgtgattcaaaagagaccattatggataatttttgctcatgatatgaac
attaaattatcaaaagaactaatggttcaaagccataagacaattgatggtcgtggagca
aatgttcatatggcatatggatgtggcattacacttcaatttgtgcacaatgtcataatt
cataacattcacattcatcgcgttgttagaagtagtggtggcctaataagggactctgaa
gatcattatggttatcgcacagtcggcgatggagatgggatttccatattcgggtcatca
aagatttggcttgatcatatttccatgtctgaatgtcaagacgggctcattgatgcaata
caaggttccactgccatcaccatctcaaattgccatttcacccatcatgatcatgtgatc
ttgttaggtgcaagtgatacctattctaaagatcaatatatgcaagtcacacttgcattc
aaccattttggcaaggaattgatacaaagaatgcctagatgtcgatggggatactttcat
gtcgtcaacaacgactacactcattggaaattgtatgccattggtggtagcacgcatccc
accattattagccaaggcaacaggttcattgctccagatgaccccttaactaaagagata
acccataggaactatgcaccagagtcagaatggaggaattggatatggagatcagaagga
gatcggttcatgaatggagcattttttgtaacatctgggccaccatcacctccccatttg
aaattaaaaaagaaggatataattaaagctaagcctgcaatatttgttggaagactcact
aaattctctgggactcttaaatgtaaagaaggagttaagtgttag
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