Gossypium hirsutum (upland cotton): 107939754
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Entry
107939754 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 20-like isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107939754
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107939754
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107939754
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107939754
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107939754
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUF7351
Motif
Other DBs
NCBI-GeneID:
107939754
NCBI-ProteinID:
XP_016728609
UniProt:
A0A1U8MST4
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Position
D03:54511771..54515718
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AA seq
627 aa
AA seq
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METQTYTDKPNDLSPSKIDQVPSLVPGSLSGSSSFSPMVAVNDSLDLATMLESFLVDETA
VTPEGLNVLSLTYQQPPSSSSDEYELSQILALLPYDSKQPHDPWVPSNEGFRIANEPTGV
GAGLENLGNTCFINAVLQCFTHTVPFVLGLRSLNHHEKPCHRNINSFCLLCAVHDHIELS
LNSSGGVVSPSKIFDNLSYISPSFERYQQEDAHEFLQCLLNRLEECCLDLKLKDDCSSSP
DICLVKKVFGGQLVRKLCCCNCGHISYSYEPLIDLSLEIEDVDTLLSALESFTKVEKIDD
LVAKFRCENCEDKVSVEKQLMLDQAPSVAAFHLKRFKTKATYVKKIDKHVVFPLELDLQP
YTNVNQTSNNEELKYQLYAVVKHSGYNPTSGHYVCYIRSSPDTWHNLNDSIVTSVEEGEV
LSQEAYILFYVREGIPWFSTAIEVHKPCTDLGTSDPSPKSVLDNTVCVSDLQPVNNTDAN
GYESKVVADETSIQFSRETQLMLELDEPCVVTKGISGPLSESKPKSIDLSDDSPISISTA
SNLGENNSNQSTFPRMPFRSQLPVHTPLFRSKEKKCAINRRRAVNRPRVLHRRSEAMRHV
KRKLNQRGMKSMALLALQPVGKMKRRR
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccaaacgtatactgataaaccaaatgatctttctccttctaaaatcgatcag
gttccgtctctagtgcccggttctttatctgggtcatcatctttttctccaatggtggct
gttaatgattcccttgatcttgccaccatgttagaaagcttcctcgtagatgaaacggcg
gtgactcctgaaggtctgaacgtgctttcgttaacgtatcaacaacccccttcgtcttct
tctgatgaatacgaattgtctcagattctagctttactcccttatgattctaagcaaccc
catgatccttgggttccttctaatgaaggttttagaattgcaaatgaaccaactggagtg
ggtgcagggctggaaaatttgggtaacacatgttttatcaatgccgtgttacaatgtttt
actcatactgttccttttgttttgggtcttcggtctttgaatcatcatgagaagccttgt
catcggaatattaatagcttttgtttactttgtgctgttcatgatcacattgagctttca
ttgaattcatctggaggagttgtttcaccatctaaaatttttgacaatttgagctatatc
tcacctagtttcgagagatatcaacaagaggatgctcacgagttccttcagtgcttgtta
aataggcttgaagaatgttgcttggacttaaagctaaaggatgattgttcgtcttctccg
gatatttgcttagttaagaaggtttttggtggtcaacttgttagaaaactatgctgttgc
aattgtggtcacatttcttacagttacgagcccttgattgatttgagtttggagatcgaa
gatgttgacacccttctgagtgctttagagtctttcaccaaggtggaaaagatagatgat
ctggttgcaaagttcaggtgtgagaattgtgaagacaaggtgtccgttgaaaaacaactt
atgctagaccaggctccttcggttgcagcattccacttgaagagatttaagactaaagca
acctacgtcaagaagatcgacaagcacgttgttttcccattagagttggatttgcagcct
tacactaatgtcaatcagacaagtaataatgaggaactgaagtatcagttatatgcagtt
gtgaagcactctggatacaaccctacttcaggacattacgtttgttacattcggtcctct
ccagatacgtggcataatttgaatgattcaattgttactagtgtcgaggaaggagaagtg
ctttctcaagaagcctacattttgttctatgttagggagggtataccttggttttcaact
gcaatagaagtacataagccttgtacagaccttggtacttctgatccttcaccaaaatcc
gttcttgataatactgtatgcgtctccgatctccaaccagtaaataataccgatgccaat
ggctatgaatctaaagttgttgctgatgaaacttcaattcagttctctcgtgaaacacaa
ttgatgcttgagcttgatgaaccatgtgttgttaccaaggggatttccggaccacttagt
gaatccaagccaaagtctattgatttgagcgatgatagtccgataagtatatctactgca
tccaatcttggggaaaacaacagcaatcagagtactttccctcgaatgccattcagatct
caattaccagtacacaccccacttttccgttcgaaagagaagaagtgtgccattaatcga
agaagagcagtcaataggcctagggtgcttcatagaagaagtgaagcaatgagacatgtt
aaaagaaagttgaatcaacgaggtatgaaatccatggctctgttggccttacaacctgtt
ggtaaaatgaagagaagaagatga
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