Gossypium hirsutum (upland cotton): 107939772
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Entry
107939772 CDS
T04793
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04016
MAPK signaling pathway - plant
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107939772
04075 Plant hormone signal transduction
107939772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107939772
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107939772
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GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_SAC51
PUMA_CC
DUF7050
bHLH_LHW
bHLH_INO4
VIR_N
Motif
Other DBs
NCBI-GeneID:
107939772
NCBI-ProteinID:
XP_016728633
UniProt:
A0A1U8MSW4
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Position
D03:complement(54479434..54481698)
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AA seq
549 aa
AA seq
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MNLWSDDNTSVMESFMSSDISALWPPPPPPPPPQQSQPSVPLNQDSLQQRLQALLEGVRN
CWTYAIFWQSSYDYAGAAVLGWGDGYYKGEEDKEKAKSKASLSTIAEQQHRKKVLRELNS
LISGSTANTDDAVDEEVTDTEWFFLVSMTQSFVNGNGLPGQAFFNSCPVWVAGSDRLANS
TCERAKQGRVFGLQTIVCIPLANGVVELGSSEFIIQSSDLVNKVRALFNGIEAETWSMSN
NTDDPSSFWISDPNNINNQNPSSSSLTENPSSIHGGLHFNNYGNSFSHLLKPESGEILNF
GGSKGIRNGNLISRKKRSPSNEEGMLSFTSDVMKSGGGGDSDHSDLEASVIKEADSARVT
ITAEPEKRPRKRGRKPANGREEPLNHVEAERQRRQKLNQRFYALRAVVPNVSKMDKASLL
GDAISYINELKIKLQNADSKKEELHKQLEETKKEGQRGGLTSSHKLLELDIDVKTIGLDA
MIRIQSNKKNHPAARLMAALQELDLDVHHASVSVVNDLMIQQVNVKMGNQFYNQEQLRIA
LTSKVGDPR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaatctttggtcggacgataacacgtcggttatggaatcttttatgagctcagacata
tctgctttatggccaccaccaccacctccgccgccgccgcagcaatctcagccgtccgtt
cctctcaaccaagactcgctccaacaacgtctccaagctctcctcgaaggtgttcgtaat
tgttggacttacgctattttttggcaatcctcatacgattacgccggcgccgccgtgctc
ggctggggagacgggtattacaaaggggaagaagataaagagaaagcaaagtcaaaagct
tctttatctacaatcgccgagcaacagcatcgtaaaaaggttctcagagaactcaactct
ttgatttccggttcaaccgccaacactgacgacgccgtcgatgaagaagtcaccgacacc
gaatggttctttttagtttccatgacccaatctttcgttaacggcaacggacttccggga
caagcttttttcaattcatgtccagtatgggtcgctggatcggaccgcttagccaattct
acgtgtgaaagagcgaaacaaggacgggttttcggtttacaaacgatagtttgtataccg
ttggcgaatggtgtcgtggaattggggtcatcggaattcattatccaaagctccgatcta
gtgaataaggttcgagcgctgtttaatggaattgaagctgaaacttggtctatgagcaac
aacactgacgacccatcatcgttttggattagtgatccaaataacattaataatcaaaat
ccgagttctagtagtttaactgagaatccgagttccattcatggcggcttgcatttcaac
aattacggaaattcattttcccatttgttgaaaccggaatccggagaaatattgaatttc
ggcggaagtaaaggaatcaggaacggtaatttgatttctcggaagaagagatcgccgagt
aatgaagaggggatgctttcttttacttccgatgtgatgaaatcgggtggtggtggagat
tcagatcattccgatctcgaagcttcggttattaaagaagcagatagtgcaagagttacc
attaccgcggaacccgaaaagagaccacgaaaacgggggagaaaaccggctaacggaaga
gaagagcctctgaatcacgtcgaagcagagcgtcaaagacgacaaaagcttaaccaaagg
ttttacgccttacgtgcagtggtaccaaacgtatccaagatggataaagcatctcttctg
ggggatgctatttcgtatattaacgagctaaagataaagctacagaatgcggattcaaag
aaagaggagttgcataaacaattagaagaaaccaagaaagaaggtcagcgaggaggcctc
acctcgtcccacaaattactagaattggatatcgacgttaagactatcggattagacgcc
atgattcgaatccaatccaataaaaagaatcatccagcagcacggttaatggctgcctta
caagagttagacctcgacgtacaccacgctagcgtatccgtcgttaacgacctgatgata
caacaggttaatgtgaagatggggaaccaattttacaaccaagaacaacttaggatcgct
ctaacatccaaagttggagatccaagatag
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