KEGG   Gossypium hirsutum (upland cotton): 107939818
Entry
107939818         CDS       T04793                                 
Name
(RefSeq) calnexin homolog
  KO
K08054  calnexin
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
ghi04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107939818
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107939818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:ghi03110]
    107939818
   04131 Membrane trafficking [BR:ghi04131]
    107939818
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:ghi04091]
    107939818
Chaperones and folding catalysts [BR:ghi03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   107939818
Membrane trafficking [BR:ghi04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    107939818
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    107939818
Lectins [BR:ghi04091]
 L-type lectins
  107939818
SSDB
Motif
Pfam: Calreticulin CFAP143 Phage_holin_2_1
Other DBs
NCBI-GeneID: 107939818
NCBI-ProteinID: XP_016728695
UniProt: A0A1U8MPG6
LinkDB
Position
A09:85218042..85220899
AA seq 532 aa
MMIMRLYALLLLLAFASLQLLCFAADVDEVFYDSFEESFDGRWIVSDKDDYKGVWKHSKS
EGHDDYGLLVSEMAKKYAIVKELDEAVNLKEGTTVLQFETRLQSGLECGGAYLKYLRPQD
AGWKPNEFDNESPYSIMFGPDKCGATNKVHFILRHKNPKSGEYIEHHLKYPPSVPSDKLT
HVFTAILKPDNEVSILVDGEEKKKASFLSAEDFEPPLIPSKTIPDPDDKKPEDWDERAKI
PDPDAVKPEDWDEDAHMEIEDEEAVKPEGWLDEEPEEIDDPEATKPEDWDDEEDGEWEAP
KIENPKCETAPGCGEWKRPMKRNPAYKGKWSPPLIDNPSYKGIWKPQEIPNPNYFELEKP
DFDPIAAIGIEIWTMQDGILFDNILIAKNDKVAESYRETTWKPKFEVEKEKQKAEDEAAD
SARLADFQRKVFDVLYKVADIPFLSKYKHQILDLIEHAETQPNLTIGVLVSIVVIILTIF
FKLIFGGKKQPIVEKKPEVAETSNGEGSSGEKAEEAEKEEAAAAPRRRRRDN
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgatgataatgaggctttacgctcttcttctcctattagctttcgcttcgctgcaactc
ctctgcttcgccgctgatgttgacgaggtgttctatgattcatttgaagagtcatttgat
ggacgatggatcgtttctgataaagatgattataaaggcgtgtggaagcattccaagagc
gaggggcatgatgactatggtcttctcgtgagtgagatggcaaagaagtatgcaatagtg
aaagagcttgatgaggctgtgaatctcaaagaaggtaccactgtgcttcagtttgagact
cgcctacagagtggactggaatgtggtggtgcatatttgaaatatcttcgtcctcaagat
gctggatggaagcctaatgagtttgacaatgaatccccttactctatcatgtttggaccc
gacaaatgtggggccacaaacaaggtgcacttcatcctgaggcataagaatcctaaaagt
ggggaatacattgaacaccatctgaaatacccaccttctgtcccatctgacaagcttact
catgtcttcactgccatattgaagcctgacaatgaggtcagcattctggttgatggtgag
gaaaagaagaaggctagcttcctttcagcagaagattttgagcctccacttatcccttcc
aagacaattcctgatcctgatgataagaagcctgaggactgggatgagagagctaagatt
cctgatccagatgccgtgaagccagaggattgggatgaggatgcacacatggaaattgaa
gatgaggaggctgtgaaacccgaaggttggttagatgaagaacccgaggagattgatgat
ccggaggcaaccaagcctgaagattgggatgatgaagaagatggtgagtgggaagccccc
aaaattgagaacccaaagtgtgagacagcccctggttgtggcgaatggaagaggccaatg
aagaggaatccagcttataaaggaaaatggtctcctccactaattgacaatcccagttac
aagggtatttggaagcctcaggagattccaaaccccaactactttgagcttgaaaagcct
gactttgatcctattgctgccattggtattgagatttggacaatgcaagatggtatatta
tttgacaatattttgatagccaaaaacgacaaggttgctgagtcatatcgggagaccacg
tggaagccaaagtttgaggttgagaaggaaaaacagaaggctgaggatgaagctgccgat
tctgccaggctcgcagactttcagaggaaggtttttgatgtcttatacaaggttgctgac
attcctttcttaagcaaatacaagcatcaaattctcgatcttattgagcatgctgagaca
cagccgaacctcaccattggtgtcttggtctctattgtggtgattattctcacgattttc
ttcaagctcatttttggtgggaagaaacaaccaatagtagagaagaaaccagaggttgct
gaaacatcaaatggtgaaggaagcagtggagaaaaggctgaagaggcggagaaggaagaa
gctgctgccgctcctcgccgaaggcgccgtgacaattga

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