Gossypium hirsutum (upland cotton): 107939818
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Entry
107939818 CDS
T04793
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
ghi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107939818
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107939818
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107939818
04131 Membrane trafficking [BR:
ghi04131
]
107939818
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ghi04091
]
107939818
Chaperones and folding catalysts [BR:
ghi03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
107939818
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
107939818
Autophagy
ER-phagy
Other ER-phagy associated proteins
107939818
Lectins [BR:
ghi04091
]
L-type lectins
107939818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
CFAP143
Phage_holin_2_1
Motif
Other DBs
NCBI-GeneID:
107939818
NCBI-ProteinID:
XP_016728695
UniProt:
A0A1U8MPG6
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Position
A09:85218042..85220899
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AA seq
532 aa
AA seq
DB search
MMIMRLYALLLLLAFASLQLLCFAADVDEVFYDSFEESFDGRWIVSDKDDYKGVWKHSKS
EGHDDYGLLVSEMAKKYAIVKELDEAVNLKEGTTVLQFETRLQSGLECGGAYLKYLRPQD
AGWKPNEFDNESPYSIMFGPDKCGATNKVHFILRHKNPKSGEYIEHHLKYPPSVPSDKLT
HVFTAILKPDNEVSILVDGEEKKKASFLSAEDFEPPLIPSKTIPDPDDKKPEDWDERAKI
PDPDAVKPEDWDEDAHMEIEDEEAVKPEGWLDEEPEEIDDPEATKPEDWDDEEDGEWEAP
KIENPKCETAPGCGEWKRPMKRNPAYKGKWSPPLIDNPSYKGIWKPQEIPNPNYFELEKP
DFDPIAAIGIEIWTMQDGILFDNILIAKNDKVAESYRETTWKPKFEVEKEKQKAEDEAAD
SARLADFQRKVFDVLYKVADIPFLSKYKHQILDLIEHAETQPNLTIGVLVSIVVIILTIF
FKLIFGGKKQPIVEKKPEVAETSNGEGSSGEKAEEAEKEEAAAAPRRRRRDN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgatgataatgaggctttacgctcttcttctcctattagctttcgcttcgctgcaactc
ctctgcttcgccgctgatgttgacgaggtgttctatgattcatttgaagagtcatttgat
ggacgatggatcgtttctgataaagatgattataaaggcgtgtggaagcattccaagagc
gaggggcatgatgactatggtcttctcgtgagtgagatggcaaagaagtatgcaatagtg
aaagagcttgatgaggctgtgaatctcaaagaaggtaccactgtgcttcagtttgagact
cgcctacagagtggactggaatgtggtggtgcatatttgaaatatcttcgtcctcaagat
gctggatggaagcctaatgagtttgacaatgaatccccttactctatcatgtttggaccc
gacaaatgtggggccacaaacaaggtgcacttcatcctgaggcataagaatcctaaaagt
ggggaatacattgaacaccatctgaaatacccaccttctgtcccatctgacaagcttact
catgtcttcactgccatattgaagcctgacaatgaggtcagcattctggttgatggtgag
gaaaagaagaaggctagcttcctttcagcagaagattttgagcctccacttatcccttcc
aagacaattcctgatcctgatgataagaagcctgaggactgggatgagagagctaagatt
cctgatccagatgccgtgaagccagaggattgggatgaggatgcacacatggaaattgaa
gatgaggaggctgtgaaacccgaaggttggttagatgaagaacccgaggagattgatgat
ccggaggcaaccaagcctgaagattgggatgatgaagaagatggtgagtgggaagccccc
aaaattgagaacccaaagtgtgagacagcccctggttgtggcgaatggaagaggccaatg
aagaggaatccagcttataaaggaaaatggtctcctccactaattgacaatcccagttac
aagggtatttggaagcctcaggagattccaaaccccaactactttgagcttgaaaagcct
gactttgatcctattgctgccattggtattgagatttggacaatgcaagatggtatatta
tttgacaatattttgatagccaaaaacgacaaggttgctgagtcatatcgggagaccacg
tggaagccaaagtttgaggttgagaaggaaaaacagaaggctgaggatgaagctgccgat
tctgccaggctcgcagactttcagaggaaggtttttgatgtcttatacaaggttgctgac
attcctttcttaagcaaatacaagcatcaaattctcgatcttattgagcatgctgagaca
cagccgaacctcaccattggtgtcttggtctctattgtggtgattattctcacgattttc
ttcaagctcatttttggtgggaagaaacaaccaatagtagagaagaaaccagaggttgct
gaaacatcaaatggtgaaggaagcagtggagaaaaggctgaagaggcggagaaggaagaa
gctgctgccgctcctcgccgaaggcgccgtgacaattga
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