KEGG   Gossypium hirsutum (upland cotton): 107939826
Entry
107939826         CDS       T04793                                 
Name
(RefSeq) splicing factor-like protein 1
  KO
K13095  splicing factor 1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107939826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107939826
Spliceosome [BR:ghi03041]
 Complex A
  Other components
   Complex A specific factors
    107939826
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP RRM_1 KH_1 KH_12 eIF3g zf-CCHC PHD_4 KH_PNO1_2nd RRM_5 zf-CCHC_2
Other DBs
NCBI-GeneID: 107939826
NCBI-ProteinID: XP_016728699
UniProt: A0A1U8MT24
LinkDB
Position
A09:complement(85299534..85303184)
AA seq 786 aa
MDSVQTNLNDPQSFSVQTLNSYNQNPPPPPSQTFDSDPVLEHNNANNGALSNPDAHSNTI
NNTSSFKPDIHKPLLSENGLTNTHSGTTDKDYSGGEEETTSRRRRRSRWDPPSNSNNHQT
GNDESASGTKKRKSRWADDEPKPVIQLPDFMKDFTGGIQFDPEIQALNSRLLEISRMLQS
GLPLDDRPEGARSPSPEPIYDNLGIRINTREYRARERLTKERQEIISQILKKNPAFKPPA
DYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQ
QKRDLKPDPAENEDLHVLVEAETQESLDAAAAMVEKLLQPVDEVLNEHKRQQLRELAALN
GTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPMKGTTGKKMDD
EYQNFLAELGGTVPDSANKQNSSSVSSGSNPPWASSSGAAGSAHPGLGSNAVKPPKEYDD
TNLYIGYLPPSLDDDGLISLFSAYGDIVMAKVIKDRVTGLSKGYGFVKYASVDMANNAIK
GMNGSLLEGRTIAVRVAGKPPQPAVPPGPPTLSMPAYPVSSQPVGAYPSRQFTTGGPIPN
AAPASYAGNPVPWGPPVPPPPPYAPYAPPPPPPPGSTIYPPVHGQPMPPYGLQYPPQMQT
VPPGVAPPPPPVTSSETAQSFPPGVQSENSTSAPAMPANIYGNSMTAMPPNSQSAYPTSS
LGYSSYYNAVPPPPPPPLPTSSTDNSQSLSNVPWAPNPLLTPAASSGEKTTYGADTEYEK
FMAEMK
NT seq 2361 nt   +upstreamnt  +downstreamnt
atggattctgtccaaacaaaccttaatgatccccaatctttttctgtgcaaaccctaaat
tcatacaaccaaaaccctcctccgcctccatctcagacattcgattccgatcctgtcctt
gaacacaacaacgccaacaacggtgccctgtctaatcccgatgcccattccaatactatt
aacaatacttcttcatttaaacccgacatccacaagcctctactgtcggaaaatgggtta
actaacacccatagcggtaccacagacaaggattattctggcggggaagaggagaccacc
agcagaaggcgaaggaggagccgctgggacccgccctcaaattccaacaaccaccagaca
ggtaatgatgagtctgcctctggaaccaagaagaggaagtcccggtgggcagatgatgag
cccaagcccgtgattcagctccctgattttatgaaggatttcactggaggtatccaattt
gaccctgagattcaagctttgaatagtaggcttctagagattagtaggatgcttcaatct
ggattgcctttggatgatagacctgagggagctaggtctccttcgcctgaacctatatat
gataatttgggaattaggattaacaccagggaataccgggcaagagagagattgaccaaa
gaacgacaagaaattatatctcagattcttaagaagaatcctgcgtttaagccaccagct
gactataggccaccaaagcttcagaagaagctttatatacccatgaaagaatacccaggc
tacaattttatcggcttgattattgggcctagagggaatacccaaaagaggatggagaag
gaaacgggtgcgaagattgtaattaggggtaaaggttccgtgaaagaaggtaggctgcag
cagaagagagatttgaagcctgatcctgcagagaacgaggacttgcatgttttggttgag
gccgaaacacaagaatcacttgatgctgctgcagcaatggtggaaaagctcttgcagcct
gtagatgaagtattaaatgagcataagaggcaacagttgagggaacttgctgcgttgaat
ggaacaataagagatgaagagtattgtaggttgtgtggtgagcctgggcaccgtcaatat
gcatgtccttctcgcacctcaacctttaagagtgatgttttatgtaagatttgtggtgat
ggtgggcatccaacaatcgattgtccaatgaagggaactacagggaagaaaatggatgat
gaatatcagaatttcttggctgagctaggtggtactgtccctgattcagctaacaagcaa
aactcttcgtcagtcagttctggaagcaatcctccttgggctagcagctctggagctgct
ggaagtgcacaccctggcttaggttccaatgctgttaagccccccaaagaatatgatgat
actaatttgtacattggatacttgcctcctagtcttgatgatgatggtttgattagtttg
ttttctgcttatggtgatattgtgatggcaaaggtaatcaaggaccgggttactggactg
agtaaagggtatggttttgtgaagtatgctagtgttgacatggcaaacaatgctattaag
ggaatgaatggtagtcttctagagggaagaaccattgctgtgagagttgctggcaagcca
ccacaacctgctgtgcctcctggtccacccacattgtcaatgcccgcttaccctgtctct
agtcagccagttggtgcctatccatcacgacaatttacaactggaggtcctattcctaat
gctgctcctgctagttatgcgggaaatccagttccatggggaccaccagttcctcctcct
cccccttatgccccttatgcccctcctccccctcctcctcctggctcaaccatttatcct
cctgttcatggtcagcctatgccaccttatggtttgcaatatcccccacaaatgcagacg
gttcctcctggtgttgcacctccacctccacctgtgacttctagtgaaacagcacaaagt
tttccaccaggagtgcaatctgaaaatagcacgtctgccccagctatgcctgctaatatc
tacgggaactcaatgactgcaatgcctccaaattcacaatctgcatatcctacatcttct
ttaggttactcttcttattacaatgcagttcccccccctccccctcctccactacctaca
tcttccacagataattctcagagccttagtaatgtcccttgggctccaaaccctcttttg
actccggcagcatcctctggagagaaaacaacctatggtgcagatactgagtatgagaag
ttcatggcagagatgaagtga

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