Gossypium hirsutum (upland cotton): 107939826
Help
Entry
107939826 CDS
T04793
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107939826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107939826
Spliceosome [BR:
ghi03041
]
Complex A
Other components
Complex A specific factors
107939826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
PHD_4
KH_PNO1_2nd
RRM_5
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
107939826
NCBI-ProteinID:
XP_016728699
UniProt:
A0A1U8MT24
LinkDB
All DBs
Position
A09:complement(85299534..85303184)
Genome browser
AA seq
786 aa
AA seq
DB search
MDSVQTNLNDPQSFSVQTLNSYNQNPPPPPSQTFDSDPVLEHNNANNGALSNPDAHSNTI
NNTSSFKPDIHKPLLSENGLTNTHSGTTDKDYSGGEEETTSRRRRRSRWDPPSNSNNHQT
GNDESASGTKKRKSRWADDEPKPVIQLPDFMKDFTGGIQFDPEIQALNSRLLEISRMLQS
GLPLDDRPEGARSPSPEPIYDNLGIRINTREYRARERLTKERQEIISQILKKNPAFKPPA
DYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQ
QKRDLKPDPAENEDLHVLVEAETQESLDAAAAMVEKLLQPVDEVLNEHKRQQLRELAALN
GTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPMKGTTGKKMDD
EYQNFLAELGGTVPDSANKQNSSSVSSGSNPPWASSSGAAGSAHPGLGSNAVKPPKEYDD
TNLYIGYLPPSLDDDGLISLFSAYGDIVMAKVIKDRVTGLSKGYGFVKYASVDMANNAIK
GMNGSLLEGRTIAVRVAGKPPQPAVPPGPPTLSMPAYPVSSQPVGAYPSRQFTTGGPIPN
AAPASYAGNPVPWGPPVPPPPPYAPYAPPPPPPPGSTIYPPVHGQPMPPYGLQYPPQMQT
VPPGVAPPPPPVTSSETAQSFPPGVQSENSTSAPAMPANIYGNSMTAMPPNSQSAYPTSS
LGYSSYYNAVPPPPPPPLPTSSTDNSQSLSNVPWAPNPLLTPAASSGEKTTYGADTEYEK
FMAEMK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtccaaacaaaccttaatgatccccaatctttttctgtgcaaaccctaaat
tcatacaaccaaaaccctcctccgcctccatctcagacattcgattccgatcctgtcctt
gaacacaacaacgccaacaacggtgccctgtctaatcccgatgcccattccaatactatt
aacaatacttcttcatttaaacccgacatccacaagcctctactgtcggaaaatgggtta
actaacacccatagcggtaccacagacaaggattattctggcggggaagaggagaccacc
agcagaaggcgaaggaggagccgctgggacccgccctcaaattccaacaaccaccagaca
ggtaatgatgagtctgcctctggaaccaagaagaggaagtcccggtgggcagatgatgag
cccaagcccgtgattcagctccctgattttatgaaggatttcactggaggtatccaattt
gaccctgagattcaagctttgaatagtaggcttctagagattagtaggatgcttcaatct
ggattgcctttggatgatagacctgagggagctaggtctccttcgcctgaacctatatat
gataatttgggaattaggattaacaccagggaataccgggcaagagagagattgaccaaa
gaacgacaagaaattatatctcagattcttaagaagaatcctgcgtttaagccaccagct
gactataggccaccaaagcttcagaagaagctttatatacccatgaaagaatacccaggc
tacaattttatcggcttgattattgggcctagagggaatacccaaaagaggatggagaag
gaaacgggtgcgaagattgtaattaggggtaaaggttccgtgaaagaaggtaggctgcag
cagaagagagatttgaagcctgatcctgcagagaacgaggacttgcatgttttggttgag
gccgaaacacaagaatcacttgatgctgctgcagcaatggtggaaaagctcttgcagcct
gtagatgaagtattaaatgagcataagaggcaacagttgagggaacttgctgcgttgaat
ggaacaataagagatgaagagtattgtaggttgtgtggtgagcctgggcaccgtcaatat
gcatgtccttctcgcacctcaacctttaagagtgatgttttatgtaagatttgtggtgat
ggtgggcatccaacaatcgattgtccaatgaagggaactacagggaagaaaatggatgat
gaatatcagaatttcttggctgagctaggtggtactgtccctgattcagctaacaagcaa
aactcttcgtcagtcagttctggaagcaatcctccttgggctagcagctctggagctgct
ggaagtgcacaccctggcttaggttccaatgctgttaagccccccaaagaatatgatgat
actaatttgtacattggatacttgcctcctagtcttgatgatgatggtttgattagtttg
ttttctgcttatggtgatattgtgatggcaaaggtaatcaaggaccgggttactggactg
agtaaagggtatggttttgtgaagtatgctagtgttgacatggcaaacaatgctattaag
ggaatgaatggtagtcttctagagggaagaaccattgctgtgagagttgctggcaagcca
ccacaacctgctgtgcctcctggtccacccacattgtcaatgcccgcttaccctgtctct
agtcagccagttggtgcctatccatcacgacaatttacaactggaggtcctattcctaat
gctgctcctgctagttatgcgggaaatccagttccatggggaccaccagttcctcctcct
cccccttatgccccttatgcccctcctccccctcctcctcctggctcaaccatttatcct
cctgttcatggtcagcctatgccaccttatggtttgcaatatcccccacaaatgcagacg
gttcctcctggtgttgcacctccacctccacctgtgacttctagtgaaacagcacaaagt
tttccaccaggagtgcaatctgaaaatagcacgtctgccccagctatgcctgctaatatc
tacgggaactcaatgactgcaatgcctccaaattcacaatctgcatatcctacatcttct
ttaggttactcttcttattacaatgcagttcccccccctccccctcctccactacctaca
tcttccacagataattctcagagccttagtaatgtcccttgggctccaaaccctcttttg
actccggcagcatcctctggagagaaaacaacctatggtgcagatactgagtatgagaag
ttcatggcagagatgaagtga
DBGET
integrated database retrieval system