Gossypium hirsutum (upland cotton): 107939976
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Entry
107939976 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG5
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107939976
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107939976
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107939976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
TerY_C
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
107939976
NCBI-ProteinID:
XP_040950731
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All DBs
Position
D05:complement(39028347..39034449)
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AA seq
468 aa
AA seq
DB search
MGGKSSKDSSGRAYPTSRSGGSDSWSRYGYPPQSGYPPQTPYYTPRHHHAPPHSSNYGLQ
TLHRGHTIVKYSRIADNYETLDQVTAALAQAGLESSNLIVGIDFTKSNEWTGARSFNRKS
LHHIGNGQNPYEQAISIIGQSLSAFDEDNFIPCYGFGDASTHDQDVFSFYPEERFCNGFE
EVLARYREIVPQLRLAGPTSFAPIIEMAMTIVEQSGGQYHVLLIIADGQVTRSVDTQHGQ
LSPQEQKTIDAIVRASEFPLSIVLVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMS
KNTDSSRKQAEFALSALMEIPAQYKATIELGLLGQRKGNTFERVPLPPPMYGASSFNNPK
SYSRSSSFQQDPSPYSQSGSFKQNSSPYSRSSSFQQNIPLYSGYDTSAATATGPSSSSLY
DHQICPICLGNPKDMAFGCGHQTCCDCGEDLQICPICRSAIQTRIRLY
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaaaaagctcaaaggattctagtggaagagcgtatccgacaagtaggtccggt
ggttcagattcatggagtcgttacggatatccaccgcaatcaggatatcctccacagact
ccttactatacaccacggcatcaccatgctccacctcactcaagtaattacggattgcaa
acactccatcgcgggcatacgattgtgaaatactcaaggatagctgataactacgaaact
ttggaccaggttactgctgccctcgcacaagctggcctcgagtcctctaacctcatcgtt
ggtatcgatttcacaaaaagcaacgaatggacaggtgcaaggtcattcaaccgcaaaagc
ttgcatcacatcgggaatggccaaaatccctatgaacaagctatatcaattattggacag
agcttatccgcttttgatgaggataacttcattccatgttatggattcggagatgcgtca
acacatgatcaagatgtcttcagtttctatccggaagagagattctgcaatggatttgag
gaggtgcttgcacgatacagagaaattgttccccagcttcgactcgcagggccaacatcc
tttgcacccatcattgaaatggccatgactattgtcgagcaaagtggtggtcagtaccat
gttttgctgataattgctgatggacaggtgactcgaagtgtcgacacacagcatggtcag
cttagcccccaagagcaaaagacaatcgatgcaatcgttagagcaagtgaattccccttg
tctattgtcctagttggggttggtgatggaccttgggacatgatgagggagtttgatgat
aacatccctgctcgtgctttcgacaattttcagtttgtgaacttcacagagattatgtcg
aagaatacagattcatcgagaaagcaggcagaattcgctctttcagccttgatggaaatt
cctgctcagtataaagcaactattgagctcggcctgttgggacaaagaaagggaaatact
tttgagagagttcctctccctcctcccatgtatggtgcctcatctttcaataacccgaag
tcctattctcgctcaagcagttttcagcaggatccatctccgtattctcaatccggcagt
tttaagcaaaattcatctccctattctcgctcaagcagttttcagcaaaatatacctctg
tattctggatatgatacctctgctgccacagccacaggtccatcttcaagctccctttac
gatcatcagatttgccccatttgtcttggtaatcccaaggacatggcttttggttgcgga
catcagacttgttgtgactgcggagaagacctccaaatctgccccatatgtcggagcgcg
atccaaactcggatccggctttattga
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