Gossypium hirsutum (upland cotton): 107940014
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Entry
107940014 CDS
T04793
Name
(RefSeq) (-)-germacrene D synthase-like isoform X1
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
107940014
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
107940014
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GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
DUF5817_CT
Motif
Other DBs
NCBI-GeneID:
107940014
NCBI-ProteinID:
XP_016728911
UniProt:
A0A1U8MPZ7
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Position
D01:complement(9152675..9160684)
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AA seq
545 aa
AA seq
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MCSMSNVNRRSVNYHPSIWGDIFLSCPSKMKIDTATRQEYEELKQEITRMLMVATDGSSQ
KYRLIATIKRLGVSYLFEKEIEDALQTNFHHHEYKADQTLEYASLQFRLLRENGFNAQSE
IFNNFKDDKGNFKISLTSDVKGLLELYEASHLLVHGEHILDEALAFTTTHLELAQRIGIE
RPLSALVSHALKRPSRKALPRLEARQYISLYQEDDSHDKTLLKFAKLDFNLLQNLHKEEL
SKISKWWKELDFATKLPFARDRLVECYFWILGVYFEPQYSFAREIMTKAIVMASTMDDIY
DVHGTYEELELFTKAIERWDTSYIDGLPAYMKVFYEALFDLYEEMEKVMTKQGKSYRVQY
AKETMKQLSQAYFIEAKWYHENYVPTVEEYMKNALVSSGYPMVTITSFVGMGDVVTEETF
NWASNNPKIVRASSMIARLMDEIVSHKFEQERGHCASAVECYMKQHGVSEEKACEELKKL
IDAAWKDINQDMLFKPARAPFPVLTCVLNLAKVMDFLYKEGDGYTHVGNVTKAGITSLLV
DPVPI
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtgttccatgtccaacgtcaatcgtcgctccgtcaactatcatcctagtatttggggt
gatattttcctttcatgtccctccaaaatgaaaatagatactgcaactcggcaagaatac
gaagaactgaaacaagaaataacgaggatgcttatggtggctactgatgggtcgtctcaa
aaataccgtttaattgctacaataaaacgcttaggtgtgagttaccttttcgaaaaagag
atagaggatgctttacagactaatttccatcaccatgaatacaaagctgaccaaactctt
gagtatgcttctcttcaatttcgattgcttagagagaatggttttaatgctcaatctgaa
atattcaacaatttcaaagatgacaaaggaaatttcaagatatccttaacaagtgatgtc
aaaggcttgctagaattatatgaagcgagtcatttgcttgttcatggagagcatatacta
gatgaagcacttgctttcaccaccactcatctagagcttgcccaaagaattggcattgag
cgtcccctttcagcactagtctcccatgccctgaaacgaccaagtcgtaaggctttgcca
agattagaggcaaggcagtacatttccctatatcaagaagatgattcacatgacaaaacg
ttattgaagttcgcaaagttggatttcaacttattacaaaatttgcacaaggaagaacta
agcaagatctctaagtggtggaaagagttagattttgcaacaaaactaccttttgcacga
gatagattggttgaatgttatttttggatattaggagtgtactttgaaccccaatattcc
tttgcaagagagataatgacaaaagcaatagttatggcatcaaccatggatgacatatat
gatgtacatggcacatatgaagaacttgaactctttacaaaggcgattgagaggtgggat
accagctatattgatgggctcccagcatacatgaaagttttctacgaagcactctttgat
ctttatgaagaaatggagaaagtgatgaccaagcaaggaaaatcatacagggtacaatac
gcaaaagaaacaatgaaacaattatctcaagcttattttattgaggccaaatggtaccat
gaaaactacgtaccgacggtagaagagtacatgaaaaacgccttagtatcttctggctac
cccatggttacaatcacatcttttgttggaatgggagacgtcgttacagaagaaaccttc
aattgggcatctaacaaccctaagatcgtaagagcttcttcgatgattgcccgtctcatg
gatgagatcgtctcacacaagtttgagcaagagagaggacattgtgcatcggcggttgaa
tgctacatgaagcaacatggggtttcagaagaaaaggcatgtgaagagttaaagaagcta
attgatgctgcttggaaagatataaaccaggacatgttgtttaagccagctagggctcca
tttccagtccttacttgcgttctcaatcttgcgaaggttatggatttcctttacaaagaa
ggagatggttatacacacgtcggaaatgttacaaaggctgggattacttcactgttggtt
gatccggtgccgatttga
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