Gossypium hirsutum (upland cotton): 107940053
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Entry
107940053 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107940053
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107940053
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107940053
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107940053
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107940053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
PMI1_PMIR1-2_C
Motif
Other DBs
NCBI-GeneID:
107940053
NCBI-ProteinID:
XP_016728949
UniProt:
A0A1U8MTR6
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All DBs
Position
D08:69235200..69240748
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AA seq
959 aa
AA seq
DB search
MEATMISNSELRIEAEMEERSDLGNGSLDSASISFDISKKKIEFHPARKPFNAFKSFDDG
DFRIETLNTGSDTKRVNGVGSDLLSAKGRKADGTDKWETGLDPILGLKISFRKIGAGLEN
LGNTCFLNSVLQCLTYTEPLVAYLQSGTHQSSCRIAGFCALCAIQKHVNRALQSTGRILA
PKDLVSNLRCISRNFRNSRQEDAHEYMVNLLESMHKCCLPLGVSSESPSSYEKSLVHKIF
GGRLCSQVKCMQCSYCSNTFDPFLDLSLEIVKADSLHKALKNFTAAELLDGGERQYQCQR
CKQKVKAIKQLTVYNAPHVLTIHLKRFRAYDFGQKIDRKVEFGPTLDMKPFVSGSNEGDL
KYTLYGVLVHCGWSTHSGHYYCFVRTSSGMWYSLDDNRVVQVSERTVLEQKAYMLFYVRD
RRNTAPRKTTGILQRDNLKANVNGRSVLNQNLKEHMQTCSVGKKLSASGTCAAMTPKVIV
NGDLSKETIMKEVPSLQNHVMAEGSVLKESFFPPFNVPSKDSSEACSSNLVQGEDLQPSA
CSVGGNLGSSKTENSTVTTGGKDSDCNERGNTKGGFEIPVTLSPNCGGFQNSGTAKIASK
ETLQKISCASKIEVSSTVALEDLIGKAVKKVPGKALSMSTTSETSKNAQATMSLDKPICN
GSQAGDVSSHSTIDKTLNERGDNSSEKKIFKSPSSIPNGSLEIKAPCKKPTKKHLKRQLR
NMHIGIKLKIFRASLHMHSKKKHKKSKKRTLKAHVLLKENLLDKDCFPSDLGSSTSEKFS
TISLGLIHHRRKKAANKNVNINSGSLMNNINGEVKERIYQNGTVLASDQQAEGSSGSVLE
ANWHNSREIGSFKDGKTGSSPNRHVLTKGLGETAVARWNDMDKVSPAQTIEANDSESKGI
GYVPDEWDEEYDRGKRKKIRQNKHKFGGANLFQQIATKKTRFKKAKLDHSKSENRPFRI
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgacgatgattagtaactcggaattgagaatcgaagctgaaatggaggagcgt
tcggatcttggaaacgggtcattggattctgcttctatcagttttgacatttctaagaaa
aagatcgagtttcatccagcgaggaagccctttaatgcgtttaaaagtttcgacgatggg
gattttagaatcgagacgctgaacactgggtcggatacgaagcgtgtaaacggggtggga
tctgatctattgagtgctaaaggaaggaaggctgatgggacggataagtgggagactggt
ttggatccaattctcggtttgaagattagttttcgtaaaattggtgctggtttggagaac
cttggaaatacatgttttcttaattcggtattacaatgtctgacatacacagagcctttg
gtagcttatctacaaagtggcacacatcaaagttcttgccgtattgctgggttttgtgcc
ttatgcgctatccagaaacatgttaaccgtgctctacaatcaactgggaggatattggca
ccaaaggacctggtctcaaacctacgctgcatatctcgcaacttccgaaactctcgacag
gaggatgcacatgaatacatggtaaaccttctagaatccatgcacaagtgctgcttacct
ttaggagtatcaagtgaatcccctagctcttatgagaagagtttggtgcacaagatcttt
ggaggtcgcctttgtagtcaggttaaatgcatgcagtgttcttactgctccaacacattt
gatcccttcctagatttaagtcttgaaatagtcaaggcagattccttgcataaggcactt
aagaatttcactgctgcggagcttttagatggaggagagcggcagtatcagtgccaacgc
tgcaagcagaaagttaaggcaatcaaacagctgacagtttacaatgcacctcatgtactt
accatccatctgaagagatttcgtgcatatgattttgggcaaaagattgaccgcaaagtt
gaatttggtccgaccttagacatgaagccttttgtcagtggttccaatgaaggagatttg
aaatacactctttacggtgttctggttcattgtggatggagcactcattctggtcactac
tactgttttgttcgcacatcaagtggcatgtggtactcccttgatgacaacagggttgtc
caggtcagtgagaggactgttttggagcagaaagcttacatgttgttctatgttcgtgac
agaagaaatactgctccaagaaaaactactggtattcttcagagggataacttaaaagca
aatgttaatggaaggtctgttttaaatcaaaatcttaaggagcatatgcaaacttgttcc
gttggtaaaaagttaagtgcttcaggcacttgtgctgctatgactccgaaggttattgtt
aatggtgacttgtcaaaggagacaatcatgaaggaagtgccatctctgcaaaaccatgta
atggcagaaggttcagtgctcaaggagtcttttttcccccctttcaatgtgccatcaaaa
gactcatcagaagcatgttcttcaaatctggttcaaggtgaagacttgcaaccatcagct
tgttctgtaggtgggaatcttggcagttctaaaacagaaaattcaactgttactactggt
ggcaaagatagtgactgcaatgagaggggaaacactaaaggtggttttgaaatcccagtg
accttatcacccaattgtggtggtttccagaactcgggcactgcaaagatcgcgagtaaa
gagaccctgcagaagattagttgtgcttcaaagattgaggtttcaagcactgttgcacta
gaagatttgataggaaaagcagtgaagaaagttcctggtaaagctctatctatgagtact
actagtgaaacatcaaagaatgctcaggctactatgtctctagataagccaatttgtaac
ggtagtcaggcaggagatgtttccagccacagtaccattgataagacactgaatgagagg
ggagacaatagtagcgaaaagaaaattttcaaatccccttcgagcattccaaatggatct
ttggaaattaaagcaccctgtaaaaagccaacgaagaagcatctgaagcgtcagcttaga
aacatgcatatcggtataaaattaaaaattttcagggcatctcttcacatgcacagcaag
aagaaacataaaaagagcaagaaacgcacattgaaggcccatgttcttttaaaagagaat
ttattggataaggattgttttccctctgatctagggtcatctacatctgagaaattcagc
acaatcagtttgggtttgattcatcataggaggaaaaaggcagcaaataaaaatgttaac
attaactccggttctttgatgaataatataaatggagaagttaaagagaggatttatcag
aatggtactgttcttgcaagtgatcagcaagcagaagggagttctggctcagtcttagaa
gcaaattggcataattcaagagaaattggttcgtttaaagatggaaaaacaggctcatct
ccaaataggcatgtgcttaccaaaggtctgggggagactgctgttgccagatggaatgat
atggacaaagtatctcctgctcagaccatagaagcaaatgattcggaaagtaaaggaatt
ggttatgttccagatgaatgggatgaagaatatgacaggggtaagaggaagaagataagg
caaaataagcacaagttcggcggtgcaaatcttttccaacaaatcgccaccaagaaaaca
cggtttaagaaggctaagttagaccattctaaatcagaaaaccgaccattcaggatatga
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integrated database retrieval system
