Gossypium hirsutum (upland cotton): 107940133 Help Entry 107940133         CDS       T04793                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism ghi  Gossypium hirsutum (upland cotton) Pathway ghi03040   Spliceosome ghi04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:ghi00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107940133   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     107940133  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ghi03041]     107940133    04121 Ubiquitin system [BR:ghi04121]     107940133    03400 DNA repair and recombination proteins [BR:ghi03400]     107940133 Enzymes [BR:ghi01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      107940133 Spliceosome [BR:ghi03041]  Complex B   Other components    Prp19 complex     107940133  Complex C    Prp19-CDC5 complex     107940133 Ubiquitin system [BR:ghi04121]  Ubiquitin ligases (E3)   U-box type E3    107940133 DNA repair and recombination proteins [BR:ghi03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     107940133 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_DCAF4 NBCH_WD40 U-box Beta-prop_WDR41 Beta-prop_Aladin zf-Nse Beta-prop_RIG_2nd PEP5_VPS11_N WDR54 Beta-prop_WDR35_TULP_N PAS_11 V_ATPase_I_N WD40_like PUMA_CC Motif Other DBs NCBI-GeneID:  107940133 NCBI-ProteinID:  XP_016729052 UniProt:  A0A1U8MQE7 LinkDB All DBs Position A02:5694201..5699790 Genome browser AA seq 519 aa AA seqDB search MNCSISSEVPEEPVVSKKSGLLYEKRLIERHIADYGKCPVTGEPLTMEDIVPVKTGKIVK PRSLTAASIPGMLGMFQNEWDALMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK ERDEARSLLAQAERQAPLPASAVTAVSNGKRASEEEDMGPGAKRMRPGVSDSIIAELTEC NAALSQQRKKRQIPPTLAPIDALERYTQLSSHPLHKTNKPGITSIDINLLKDIVATGGVD SNAVLFGRTSGEILSTLSGHSKKVTSVKFVAHNDVFLSGSADKTVRIWQGSEDGNYNCRH ILKDHTAEVQAVTVHATNNYFVTASLDATWCFYDLSSGLCLTQVEDPTNSMGYTSAAFHP DGLILGTGTIGSTVRIWDVKSRGNVANFDGHTGAVTAISFSENGYFLATAAHDGVKLWDL RKLKNFRSFELYDQDTPTNSVDFDHSGSYLAIAGSDIRVYQVGSVKAEWNCIKTLPDLSG TGRATCVKFGPDARYLAVGSMDRNLRVFGLPEEDASTES NT seq 1560 nt NT seq  +upstreamnt  +downstreamnt atgaactgttcaatctccagcgaggttccggaagagcccgtcgtctccaagaaatccggc ttgctttatgagaaacgcttaatcgagaggcacattgcggactatgggaagtgtccggtt acaggggaaccgcttaccatggaggacattgtcccagtcaaaaccggcaagattgtgaag cccagatctttaacagcagctagcatcccagggatgcttggaatgtttcagaatgaatgg gatgctttgatgctatccaattttgcattggagcaacagctgcatacagctaggcaagag ctaagtcatgcactctaccagcatgatgctgcctgccgtgttattgcaagacttaaaaag gaaagggatgaagccaggtcattacttgcacaagctgagaggcaggcacctttgcctgca tctgcagttactgctgtgagcaatggaaagagagcttccgaggaagaagatatgggccct ggtgcaaagagaatgcgtcccggggtttctgatagtattatcgctgagttaacagaatgt aatgctgctttgtctcaacaacgtaaaaagcgccagatacctccaacactagctcccatt gatgctttggagaggtatactcaactttctagtcatccccttcacaagacaaacaaacca gggatcacttcaattgacatcaatcttttaaaggacattgttgccacaggtggggttgat tcaaatgctgttttatttggtcgaacatctggggagatcttatcaacacttagtggtcac tctaagaaggttacaagtgtaaaatttgtggctcataatgatgtatttttaagtggttct gcagataagactgtacgcatttggcaaggttctgaagatggaaactacaattgtaggcat attttgaaagatcatacagctgaggtgcaagctgtcacagtccatgccacaaataactac tttgtaactgcttcgcttgatgcaacatggtgcttttatgatctttcctctggcttatgc ttgacacaggttgaagaccctacaaattccatgggttatacatctgctgcatttcatccc gatggtctcatccttggaacaggcaccataggatctaccgttagaatttgggatgtgaag agtcggggaaatgttgctaactttgatggacacactggtgcagtaacagccatatctttt tcggaaaatggttacttcctagcaactgctgcacatgatggtgttaagttgtgggatcta cgtaaattaaagaatttccgttcttttgagttatatgatcaagacacgccgactaactct gtggatttcgatcatagtgggagttaccttgcaattgcaggctcagatatacgagtttac caagttggcagcgtcaaagcagaatggaattgcatcaaaactttacctgatttgtccggc acaggtagagcaacttgtgtcaaatttggtcctgatgcaaggtacttagcagttggatca atggatcgcaaccttcgggtatttggccttcctgaagaagatgcttcaacagaatcataa

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