Gossypium hirsutum (upland cotton): 107940568
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Entry
107940568 CDS
T04793
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107940568
Membrane trafficking [BR:
ghi04131
]
Protein recycling
Others
EARP complex
107940568
Endosome - Golgi transport
Tethering complex
GARP complex
107940568
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS51_Exo84_N
Sec5
Dor1
EXOC6_Sec15_N
COG5_N
COG2_N
Tma16
Motif
Other DBs
NCBI-GeneID:
107940568
NCBI-ProteinID:
XP_016729502
UniProt:
A0A1U8MRM6
LinkDB
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Position
A12:84785912..84797450
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AA seq
779 aa
AA seq
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MGTEDVPLDDKAKRMRDLLSSFYSPDPSSTNDASSNHGSLDAIDTTSFDADQYMNLLIRK
SNLEALLQRHVEMAAEIKNIDTDLQMLVYENYNKFISATDAIKRMKSNIVGMETNMEHLL
DKIMSVQSKSDGVNTFLFEKREHIEKLHRTRNLLRKVQFIYDLPVRLEKCIKSEAYADAV
KFYTGAMPIFKAYGDSSFQDCKQASEEAIAIIVKNLQGKLFSDSESIQARAEAAVLLKQL
DFPVDSLQAKLLEKLEQSLGDLQLKPDEIENVSVESNDPKQGEVSDSIPIAAHEGSVLEF
AEAIRAYRVIFPDSEGQPTKLAQDLVVKHFETTQHYVKGRISSGKLLGVLRIIWTDVLLM
DEVLSEAVLPGFSLEAAQVALKQYVASTFSYLLRDISDALLSVNVSSKEAAEELPLQVAL
EASKKAVLQGSMDVLLDFRRLLDDDLGLLVQLRDFIIDWVQEGFQDFFRALDDRFLLLSG
RKSSSSQDQDLTGAHGEKVLAGLVLVLAQLSVFIEQTAVPRITEEIAASFSGGGGRGYEN
GPAFVPGEICRIFRSAGERLLLHYTKMRTQKVSTLLRKRFTTPNWVKHKEPREVHMFVDL
FLQELKEIGSEVRQILPQGLSRKHRRSDSNGSTASSRSNQLRDDKMTRSNTQRARSQLLE
THLAKLFKQKVEIFTKVEYTQESVVTTIVKLCLKSLQEFARLQTFNRSGFQQIQLDIQFL
RTPLKETVEDEAAIDFLLDEVIVAASERCLDPIPLEPPILDKLIQAKLAKWKEQNPVTP
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggggacggaagatgttcctttggacgacaaggcgaagagaatgagagatctgctgtcg
agcttctactctccagatccttcttcgacaaacgacgcttcttcaaaccacggcagctta
gacgctatcgacaccacttctttcgatgccgatcagtacatgaacctcctgatacggaag
tcgaatttggaagcgcttcttcagaggcatgttgaaatggcggccgaaattaagaatatc
gataccgacttgcaaatgctggtttacgagaattacaacaagtttatcagtgccacggat
gcaattaaacggatgaaaagtaatattgtaggcatggaaacaaatatggaacatctgctt
gataagataatgtcagtgcaatctaaaagtgatggggtcaacacttttctttttgaaaag
agagaacatatagagaaattgcaccggacacgtaatcttctgcgtaaagttcagttcatt
tatgatctgcccgttagacttgaaaagtgcatcaagtcagaagcatatgctgatgctgtc
aagttctacactggagcaatgccaatttttaaggcatatggagattcgtcatttcaggac
tgtaaacaagcatctgaagaagcgattgctataatagttaaaaacttgcagggaaagctg
ttttcagactctgaatccattcaagctagagctgaagctgcagtgcttttgaagcagttg
gattttccggtggatagcttacaggcaaaactgcttgaaaagttagagcaatctcttgga
gaccttcagcttaaaccagatgaaattgagaatgtttctgtggagtctaatgatcctaaa
cagggagaagtttcagactcaattcctattgcagctcatgagggttctgtccttgagttt
gcggaggctatccgtgcttatcgagtaatatttcctgactcagaggggcaaccaactaaa
cttgctcaagacttggttgtcaagcactttgaaactactcagcactatgtcaagggacgg
atttcttctggcaaactcctgggtgttcttcggattatttggacagatgtgcttctaatg
gatgaagtgttaagtgaggctgttctacctggtttttctctggaggctgcccaagttgct
cttaaacagtatgttgccagcacgtttagttaccttctacgggacatatcagatgccctt
ctgagtgtaaatgttagttcaaaagaggcagcagaggagctccccttgcaggttgctttg
gaagccagcaaaaaagctgtgctccagggcagcatggatgtcttactggatttccgtaga
cttcttgatgatgacttagggctgctagttcaattgagagatttcataattgattgggtt
caagaaggatttcaggacttcttcagggctcttgatgatcgttttctcttactttcggga
agaaagagttcatccagtcaagatcaagatttaactggagcacacggcgaaaaagttctt
gctggtcttgtcctggtgttggctcaactttccgttttcattgaacaaactgctgtccca
agaattactgaggaaatagctgcatccttttctggtggtggtggtcgaggctatgaaaat
ggacctgcttttgttcctggggagatatgtcgaatatttcggtcagctggtgaaaggctt
ttgcttcattatacaaaaatgagaactcagaaggtatctactctgctaagaaagcggttt
acaacaccaaactgggtcaagcacaaggaacctagagaagttcatatgttcgttgatttg
tttcttcaagagttgaaggaaataggaagtgaggtgaggcagattttacctcaagggctc
tcgcgtaagcaccggcgctctgacagcaacggaagcactgcttcatcccggagtaaccaa
ttacgagatgataaaatgactaggtcaaatacacagagagccaggagccagcttttagaa
acacatctagcaaaattgttcaaacaaaaggttgaaatttttacaaaagttgaatatacg
caggagtccgttgtaacaactatagtaaaactttgccttaaaagcttgcaagaatttgcc
agactccagacttttaatcgaagtggtttccagcaaattcaactggatattcaattctta
aggactcctttgaaggaaactgttgaagacgaagcggcgattgatttcttacttgacgag
gtgattgttgcagcatcagagcgttgtcttgacccgattcctctcgagcctccaattttg
gacaaacttatacaagctaagttagcaaaatggaaggaacagaatccagttacaccctag
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