Gossypium hirsutum (upland cotton): 107941114
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Entry
107941114 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107941114 isoform X1
KO
K17925
sorting nexin-13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107941114
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107941114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
107941114
NCBI-ProteinID:
XP_016730131
UniProt:
A0A1U8MTF2
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Position
A13:complement(4497567..4504590)
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AA seq
1040 aa
AA seq
DB search
MKSMETIQDLIEDAKVRTVWWALATFVVTYSLTHTSTSMWMNLPIAILIVAGLRILSNEV
EFKWKVKSVRVLSYLSHLEKKQLSVNDSRLSSSPPPLKWKRKIDSPMVEAALNELIDKIL
RDFVVDLWYSEITPDREAPELMRDVILDAIGEISGRAKEINLVDLLTRDIVDLIGDHLDL
FRRNQAAIGVDVMVTLSSEERDERLKHHLMVSEELHPALISPESEYKVIQRLIGGVLAVV
LRPREAQCPLVRTIAREIVTCLVVQPLLNLANPGCINEVIEYVLLAINDGMIKVVEGFDQ
SSVEVRGDDSSSCKIASFNSQGTDLTLARLDDQKETYSDSNRCEEESVQPRPADWARKLE
AATQRRTEVLAPENLENMWTKGRNYKKKEKKYVNARFQEAIPRGFVTKSAVLTGYSGSEI
STNNVGTSTGSEEKTVMQTMPGLNLDAQLFDGNTAGTQLASEFNNSSSFGGDHHINNFND
ASEQSADGNKSRLKRSSSSSNLNVEPDTKKVFTGDIREPIISEFYSPDFGRHTEEYRGKI
TSNTVLRNEEPHVPKLRCRVIGAYVEKLGSKSFAVYSIAVTDAENRTWFVKRRYRNFERL
HRHLKEIPNYTLHLPPKRIFSSSTEDTFVHQRCIQLDKYLEDLLSIANVAEQHEVWDFLS
VSSKNYSFGKSSSVMRTLAVNVDDAADDIVRQFRGVSDGVMCKAVDLSSPPSEASSSVTG
RTLSWSADEIAKDISRQSNLETVHSASDNEEGDKDSSHGHEDDRSGSQGHGWHPDFELNT
SLPPRVIEHSGESGNLVSEKHNLGVKTELLGQQGSPAIKFPTTSSHMEDPVGMPPEWAPP
NMSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLVMEDAIDDWLLRQIYWLRREDTIA
LGIRWIQDILWPGGTFFSKAGNIQGKFENTQPNQTPSQNFSQFGGGNVNKPGSFEEQLEA
ARRASNIKKMLFDGAPTALVSLIGHKQYRRCARDIYFFTQSTICVKQLAYAILELVIISV
FPELRDLVVDLHGKKHIKVA
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgatggagacgatacaggatctgatcgaagatgccaaagtacggacggtctgg
tgggcgttggctacctttgtcgtaacttactccttgactcatacaagtacatcgatgtgg
atgaatttacctatagcaattcttattgttgctggattgcgaattttgagtaatgaggtt
gagttcaaatggaaagttaaatcagttcgtgttctgagttatttgtctcacttggagaag
aaacagttgtccgtgaatgattcccgtctttccagctcaccacctccgctcaagtggaag
cggaaaattgattctcctatggtggaggccgctctcaatgagcttattgataaaatactt
agggattttgttgtggatttgtggtattcggagattactccagatagagaggcacctgag
ttgatgcgagatgtaattttggatgctattggtgaaatatcaggaagggcgaaggagata
aaccttgttgatttgctaactcgggatatagttgatttgataggagatcacttggacctt
tttagaaggaaccaagctgcaataggtgttgatgttatggtaacattgtcatctgaagaa
agggatgaaagactgaaacaccatcttatggtttctgaagagcttcatcctgcactgatt
tcaccagagagtgagtacaaggttattcaacggcttattggtggagttttagcagtagta
ttaagaccacgagaagctcaatgtcctttggttcgaactattgctcgtgagattgttact
tgcctggttgtgcaacctcttttgaatttggcaaaccctgggtgtatcaatgaagtaatt
gaatatgttctacttgccattaatgatggtatgattaaggtggtggaaggttttgatcag
tcttcagttgaagtccgtggtgatgactcttcctcatgcaaaattgcgtcctttaatagt
cagggaactgatttgacattggctagacttgatgatcagaaagaaacatattcagattct
aacagatgcgaggaagaatcagtgcagcctcgaccagctgactgggctcgaaaattagag
gcagcaacccagagaagaactgaagttcttgcccctgaaaatcttgaaaacatgtggaca
aaaggaagaaactacaaaaagaaggagaaaaaatatgtaaacgcaagatttcaagaagct
attcctaggggttttgtgacaaagagtgctgtgttgacagggtattcaggaagtgaaatc
tctaccaacaatgttggaacttctacaggaagtgaagagaaaactgtgatgcagacaatg
cccggtttaaatcttgatgctcaattatttgatggtaacacagcaggcacacagttggcc
tcggaattcaacaactcatcgtcatttggaggagatcatcatattaacaattttaatgat
gctagtgagcaatctgctgacggaaataaaagtaggcttaagagatccagtagtagctcc
aatttgaatgttgaacctgatactaagaaggtatttacaggagatattcgagagccgatt
atttcagagttctacagccctgattttggcaggcatactgaagaatataggggtaagatt
acctcaaatacagtacttcgcaatgaggagccacatgttccgaagcttaggtgtcgggtt
attggagcatatgttgaaaaacttggatcaaaatcatttgcagtttattcaatcgctgtg
acagatgctgaaaacagaacttggtttgttaaaagaagatacaggaattttgaacggttg
catcgacatcttaaagaaattcctaattatacattacacttgcctcccaaaaggatattt
tcgtcaagcaccgaggacacttttgttcaccagcgttgcattcagcttgacaagtatcta
gaagatctgttgtctatagctaatgtggctgaacaacatgaagtgtgggactttttaagt
gtttcctcaaagaattactcttttggaaaatcttcatcagtgatgagaacccttgcagtc
aatgtggacgatgctgctgatgatattgtacgccaatttagaggagtatcagatggcgta
atgtgcaaagctgttgatttgtcttctccccctagtgaagcctcttcttcagtcactggc
aggaccttgtcatggagtgctgatgagattgctaaagacatttcaaggcaaagtaacttg
gagacagtgcatagtgcttctgataacgaagaaggtgataaagatagtagccatggtcat
gaggatgatagatctggttcccaaggccatggttggcatccagactttgagttgaacaca
agtttgcctccaagggtgatagagcatagtggagagtctggtaatttagtctctgagaaa
cataatttaggtgttaaaactgaattgcttggccagcaaggttctcctgcaataaaattc
cccacaacctcaagccatatggaggatccagttggaatgcccccggagtgggcacctcct
aacatgagcgtgcctttgctgaatctagttgataatgtgtttcagcttaagaggagaggc
tggctaagaagacaggtcttctggatatctaagcaaatattacagctggtgatggaggat
gccatcgatgactggcttttgaggcagatttattggcttcggagggaggacactattgca
ctagggattcgatggattcaagatattctgtggccaggtggtacattcttttcaaaagca
gggaatattcagggaaaattcgagaatactcagcctaaccagacaccttcgcagaacttc
agccaatttggtgggggtaatgtcaataaaccagggtcctttgaggaacaacttgaggca
gctcgtagagcaagcaacattaaaaagatgctttttgatggagctccgacagccttagtt
agcttaatcgggcacaagcaatacagacgatgtgcaagagacatatattttttcactcag
tcaactatatgtgtgaagcaacttgcttacgcgatattagaacttgtaatcatatcagtt
ttccctgagctgcgggatcttgtggtggatcttcatggaaagaaacatattaaagttgca
tag
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integrated database retrieval system
