Gossypium hirsutum (upland cotton): 107941290
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Entry
107941290 CDS
T04793
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.6
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107941290
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Motif
Pfam:
GH3
GH3_M
GH3_C
Motif
Other DBs
NCBI-GeneID:
107941290
NCBI-ProteinID:
XP_016730339
UniProt:
A0A1U8MXM5
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Position
A08:complement(118763713..118766168)
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AA seq
582 aa
AA seq
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MTDDALLKQLEESTKDFSRHQAETLRSILQHQRGVRYLQRHLPGAGDHNFLIDAATFRLS
VPLSCYDDYADYINQLADGDKCTSDDDHDHRHLLSVDPLVCFFYSSGTSSMKPKLIPYFD
STLSKGASHIAHQGSAAVLRKFFPPRPEVNKRLAFIYADSITTTKGGFKVMAASSFPLHS
SSNPNRSLFMSLSSPMEVILGSNVEHQMYCHLLCGLRNSDSIDAIHVPYAIGLIKAMWVL
ESKWKQLCDDIEKGILCSVINDVRMRDSVVQVLGGPQPDLSNRIRLIFEKKDWGGILSKL
WPNVRYIRSVMTGSMKQYYSKLKYYAGEVPLVGGDYFASECCVAINLDIKQPPDLTRFVM
LPTAAYFEFLPFDLAENNVVGEETVDVCGVEVGKVYEVVVTTYRGFYRYRLGDVVRVVGF
YNSSPLLEFVMRAPKTSNEIVTEGDLMAAMENFQLVLRNTMGMAIEIVEFTSSVDFGSSP
KRLKIFIEVKDCDMILQDKLQESNLRKCCSDLEDSLGSIYKVQRNKGEISPLSLSVLKCG
SFDRLLKLAIENGTPASQYKPPKIIRNPSIVDVLKENVIVTI
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgacgcgttgttgaagcaactagaggaatcaacgaaggatttctctcgtcat
caggccgagactctccgatccatcctccaacaccagcgcggcgtgcgttatctccaacgc
cacctccccggtgctggagatcacaatttcctgatcgacgccgccacttttagactctcc
gtgccgttatcttgctacgatgactacgctgattacatcaatcaattagccgacggagac
aagtgcaccagtgatgatgatcacgatcatcgccacctcttgtccgttgatcctctcgtt
tgcttcttttacagttctggaacgagttcaatgaagcctaaattgataccttactttgat
tcaacgctttcaaaaggggcgtcgcatatagctcatcaaggaagcgccgctgttcttcgg
aagttttttcctccaaggcccgaagtgaataagaggctagcatttatatatgccgatagc
attacaacaacgaaagggggtttcaaggtaatggcagcttcttcattccctttgcatagt
agtagtaatccgaatcgctctctatttatgtctctcagcagccccatggaagtgattctt
ggatcaaatgttgagcaccaaatgtactgtcaccttctctgtggtcttagaaattctgat
tctatagatgctattcatgtcccatatgccataggtttgattaaagctatgtgggtctta
gaatccaagtggaagcaactatgtgatgatattgaaaaagggatcctgtgttcggtgatt
aatgatgttcgaatgagggattctgttgttcaggttcttggtggaccacaaccagatttg
tcaaatagaattagattgatttttgaaaagaaggattggggtgggattttgagtaaatta
tggccaaatgttcgatatattagaagtgtcatgaccggtagtatgaagcagtactattcc
aagcttaagtactatgcaggggaggtacctctggtaggtggggattactttgcatcagag
tgttgcgtggccattaacttggatatcaagcaaccacctgatttgactagatttgttatg
cttccaaccgctgcatatttcgagttccttccatttgatttagctgagaacaatgttgtt
ggtgaagaaactgtggatgtttgtggtgttgaagtagggaaggtgtatgaagtagttgtg
actacttatagagggttttatagatatcgcctaggtgatgttgtaagagttgttggtttc
tacaactcatctcccttgctggagtttgtgatgcgagctcctaaaacttcaaatgagata
gtgactgagggagatctgatggctgccatggaaaattttcaacttgtactgagaaatact
atgggcatggcgatagagattgtggagtttacgagttccgttgactttggttcaagtcct
aagagattgaagatctttattgaagttaaagactgtgatatgattttgcaggacaagttg
caggaatcaaaccttagaaaatgttgttcagatctcgaagacagtttaggaagtatttat
aaggtgcagaggaacaaaggagagataagccctttatcactatcagttttgaaatgtggt
agctttgataggttactaaaactagcaatagagaatggaactccagctagtcaatataag
ccacctaagattataagaaaccctagcattgttgatgttttgaaagaaaatgttattgtg
actatataa
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