KEGG   Gossypium hirsutum (upland cotton): 107941296
Entry
107941296         CDS       T04793                                 
Name
(RefSeq) peroxisome biogenesis factor 10
  KO
K13346  peroxin-10
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    107941296
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107941296
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Peripheral membrane proteins
    107941296
SSDB
Motif
Pfam: Pex2_Pex12 zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-rbx1 zf-RING_UBOX RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_5 Prok-RING_4 RNA_polI_A14 zf-RING_6
Other DBs
NCBI-GeneID: 107941296
NCBI-ProteinID: XP_016730343
UniProt: A0A1U8MXT0
LinkDB
Position
D07:2209122..2212563
AA seq 436 aa
MSLRFPPISCLCLCLRTPLHHFDLRGKEKKKKASISLRTETEMGSGRNDSPGSGNPGPSG
ESDPSPPTEPRRFPLAAQPEIMRAAEKDDQYASFVYDACRDAFRHLFGTRVAVAYQNETK
LLGQMLYYVLTTGSGQQTLGEEYCDITQVAGPHGLSPTPARRALFIVYQTAVPYIAERIS
SRIASRGITLADLQSDEFYSNSGSERSQVESSTGVEISLPSESTASVSALSRLKEKLRGM
CLRAVQRWPAVLPIAREFLQWVLRANLMFFYFEGFYYHISKRAAGIRYVFIGKPSNQRPR
YQILGIFLLIQLCIIAAEGLRRSNVSSITSSIHQTSLGSHQNPTGQGLPLLNEEGNLIPT
EADRGSWVGESTSESTGVVSKCILCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCR
TPITHSSLVCLYHSDF
NT seq 1311 nt   +upstreamnt  +downstreamnt
atgtcgttacgtttccctccaatctcttgtctctgtttgtgcctcagaactcctctccac
cacttcgacttgagagggaaagaaaaaaaaaaaaaagcttcgatttcactgagaactgaa
acggagatgggatcggggagaaacgactcgcccgggtcaggcaacccaggtccaagtggg
gaatcggatccctcccccccgacggagccacggcgattccctcttgcagctcaacccgag
ataatgagagcggcggagaaagacgaccaatacgcttccttcgtctacgacgcctgccgc
gacgccttccgccatctttttggtaccagagttgcagtagcttatcagaacgagacaaaa
ctcctaggtcaaatgctttactatgttttaacaacaggttctgggcagcaaacattagga
gaagaatactgtgatataactcaggttgctggacctcatggcctttccccaacacctgct
agacgtgctctctttattgtgtatcagactgcagttccttacattgccgaaagaattagc
tctagaattgcgtcccgtggtattacccttgctgatttgcagtctgatgagttctatagt
aacagtggttctgagaggagtcaagtagagtcatccacaggcgttgaaatttcattaccc
tcagagtctactgcatcagtatctgcactgtcgaggttgaaagagaaactgcgtggaatg
tgtttacgtgcagttcagagatggccagcagtgctgcctatagctcgtgaattcttgcaa
tgggttctacgtgctaacctcatgttcttctactttgaaggtttctattatcatatatcc
aaacgagcagctggtattcgctatgtgtttattgggaagccatcaaatcaaagacccagg
taccaaatcctggggattttcctcttaattcagctatgcatcattgccgctgaaggtctg
cggcgcagcaacgtatcttcaattacaagttcaattcatcaaacctcattagggtctcat
caaaatccaacaggacaaggtttacctctgttaaatgaagaaggcaacttgataccaacg
gaggctgaccggggtagctgggttggtgaatcaacttcagagtcaacaggtgttgtcagc
aaatgcatcttatgcctaagtaaccgacaacacccgacggctacaccatgcggtcatgta
ttctgctggaactgcatcatggaatggtgcaacgagaaacccgaatgcccactttgccgc
actcccataacacattcgagtctagtttgtttatatcattcagacttttag

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