Gossypium hirsutum (upland cotton): 107941296
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Entry
107941296 CDS
T04793
Name
(RefSeq) peroxisome biogenesis factor 10
KO
K13346
peroxin-10
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107941296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107941296
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
107941296
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-RING_5
Prok-RING_4
RNA_polI_A14
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
107941296
NCBI-ProteinID:
XP_016730343
UniProt:
A0A1U8MXT0
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Position
D07:2209122..2212563
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AA seq
436 aa
AA seq
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MSLRFPPISCLCLCLRTPLHHFDLRGKEKKKKASISLRTETEMGSGRNDSPGSGNPGPSG
ESDPSPPTEPRRFPLAAQPEIMRAAEKDDQYASFVYDACRDAFRHLFGTRVAVAYQNETK
LLGQMLYYVLTTGSGQQTLGEEYCDITQVAGPHGLSPTPARRALFIVYQTAVPYIAERIS
SRIASRGITLADLQSDEFYSNSGSERSQVESSTGVEISLPSESTASVSALSRLKEKLRGM
CLRAVQRWPAVLPIAREFLQWVLRANLMFFYFEGFYYHISKRAAGIRYVFIGKPSNQRPR
YQILGIFLLIQLCIIAAEGLRRSNVSSITSSIHQTSLGSHQNPTGQGLPLLNEEGNLIPT
EADRGSWVGESTSESTGVVSKCILCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCR
TPITHSSLVCLYHSDF
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttacgtttccctccaatctcttgtctctgtttgtgcctcagaactcctctccac
cacttcgacttgagagggaaagaaaaaaaaaaaaaagcttcgatttcactgagaactgaa
acggagatgggatcggggagaaacgactcgcccgggtcaggcaacccaggtccaagtggg
gaatcggatccctcccccccgacggagccacggcgattccctcttgcagctcaacccgag
ataatgagagcggcggagaaagacgaccaatacgcttccttcgtctacgacgcctgccgc
gacgccttccgccatctttttggtaccagagttgcagtagcttatcagaacgagacaaaa
ctcctaggtcaaatgctttactatgttttaacaacaggttctgggcagcaaacattagga
gaagaatactgtgatataactcaggttgctggacctcatggcctttccccaacacctgct
agacgtgctctctttattgtgtatcagactgcagttccttacattgccgaaagaattagc
tctagaattgcgtcccgtggtattacccttgctgatttgcagtctgatgagttctatagt
aacagtggttctgagaggagtcaagtagagtcatccacaggcgttgaaatttcattaccc
tcagagtctactgcatcagtatctgcactgtcgaggttgaaagagaaactgcgtggaatg
tgtttacgtgcagttcagagatggccagcagtgctgcctatagctcgtgaattcttgcaa
tgggttctacgtgctaacctcatgttcttctactttgaaggtttctattatcatatatcc
aaacgagcagctggtattcgctatgtgtttattgggaagccatcaaatcaaagacccagg
taccaaatcctggggattttcctcttaattcagctatgcatcattgccgctgaaggtctg
cggcgcagcaacgtatcttcaattacaagttcaattcatcaaacctcattagggtctcat
caaaatccaacaggacaaggtttacctctgttaaatgaagaaggcaacttgataccaacg
gaggctgaccggggtagctgggttggtgaatcaacttcagagtcaacaggtgttgtcagc
aaatgcatcttatgcctaagtaaccgacaacacccgacggctacaccatgcggtcatgta
ttctgctggaactgcatcatggaatggtgcaacgagaaacccgaatgcccactttgccgc
actcccataacacattcgagtctagtttgtttatatcattcagacttttag
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