Gossypium hirsutum (upland cotton): 107941346
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Entry
107941346 CDS
T04793
Name
(RefSeq) transcription initiation factor TFIID subunit 8-like
KO
K14649
transcription initiation factor TFIID subunit 8
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107941346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107941346
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107941346
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromo_TP
TAF8_C
Motif
Other DBs
NCBI-GeneID:
107941346
NCBI-ProteinID:
XP_016730393
UniProt:
A0A1U8MXY1
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Position
D09:complement(2209766..2211538)
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AA seq
377 aa
AA seq
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MNNGCLENRKKEHDNSQKRPKSYKFGSKSDDFALAIAKVAVAQLCESVGFQGFHLSALET
LSDISVRYIYSIGKTANLSANLAGRVEGNVFDIIHGLEDLGSNLGFSGASDVDRCVVSSG
VVKDITHFVGVSDFIPFAYDVPGFPVVKESTKTGSFWEKEEVPPGEHIPSWLPAFPDPET
YETRLSVENETMGVSNGKKTESELERVERKMDRSLLNLQLRFAHNENKGGSSHGSGYVAT
ESNPYLAAPLHVGEKEVSPVVLPTKLSNEVALRNPVHVDVGNHVSVLETFAPAIEAMKSG
LCDSDNGKKKLLYDQRPTVRFKIGIGKKSLGTISDFGSQNEEDLLKIASWFGNDNEKDDK
KRRVEKILKESVESSKE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgggtgtttggagaatagaaaaaaagaacatgacaattcacaaaaacggcca
aagtcttacaaattcggtagcaaaagtgacgattttgccctagcaatcgcgaaggttgca
gtggcgcaactatgtgaaagcgtagggtttcagggttttcatctctctgctttagaaacc
ttgtctgatataagtgttaggtatatttacagcatagggaaaactgcgaatcttagtgct
aatttagccgggagagtggaagggaatgtgtttgacattattcatgggttagaagattta
ggatcaaatttaggattctccggcgcgtccgatgttgaccgctgtgttgttagttcaggg
gtagttaaggatattactcactttgtcggtgtttcggattttatcccatttgcttatgat
gttcccggattcccggttgttaaagagtcgacaaaaactgggagtttttgggaaaaagaa
gaagttcctcctggggagcatataccgagttggttgcctgcttttcctgaccctgagact
tatgagactcggttgagtgtagagaatgaaacgatgggtgtttctaatgggaagaagact
gagtctgagttagaaagggttgaaaggaagatggatcggtcattgttgaatttgcagttg
cggtttgctcataatgaaaataaaggaggttcttcacatggtagtggatatgttgctact
gagagcaatccgtatcttgctgcacctttgcatgttggggaaaaggaagtgtcaccggtt
gttcttccaactaagctttcaaatgaagtggctttgagaaatccggttcatgtcgatgtg
ggaaaccatgtttctgtgttggagacatttgctcctgccattgaagcaatgaagagtggg
ttatgtgattctgacaatggaaagaagaaacttctttatgatcagaggcctacagtgcgt
tttaagattggaattggaaagaaatccttaggcacaatatcagatttcggttcacagaat
gaggaggaccttctgaagattgcctcttggtttggaaacgataatgaaaaggatgacaag
aaaagacgagtggaaaaaattctgaaagaatctgtagaaagctccaaggaataa
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