Gossypium hirsutum (upland cotton): 107941459
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Entry
107941459 CDS
T04793
Name
(RefSeq) protein SDA1 homolog isoform X1
KO
K14856
protein SDA1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107941459
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
107941459
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
SDA1_dom
DUF29
Motif
Other DBs
NCBI-GeneID:
107941459
NCBI-ProteinID:
XP_016730513
UniProt:
A0A1U8MY89
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Position
D12:62464855..62470174
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AA seq
809 aa
AA seq
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MVSMVSGSAEPLSASGRSSEKLSLLSLQSKMKTDPQGYETELHLIRNQFYSALELFQQQA
ALNFSSISGVGADPTVAKDLSDRAMFLAHVTPFYPKQLAEFPSDLAAFLKSSARTLPSGL
RFHATQAVILLVNRKIIDIKDTLSLFMELQTLDDRNLRKLAFSHVVHSIRRMNKNHKNEA
KNRSLQNILFGLLQQDDEAKAKRSLITLCEHHRRKVWFDERTANAICMACFHSSSRIMIA
VLSFLLDYEKIENDDEDSDDLSSEDEMIQNPRVVISKETVYKAHHKGTAASKKKKKAKLQ
RAIRSMKRQQRLSSESSNCSYYSPLYHLKDAQGFVEKLFSRLQTCNERFEVKMMMLKVIA
RTVGLHRLILLNFYPFLQRYVQPHQKDITNLLAAAVQACHDMVPPDAVEPLFKQIVNQFV
HDRSRPEAIAVGLNVIREICLRMPLLMTEDLLQDLVLYKKSHEKAVSAAARSLITLFREV
CPSLLVKKDRGRPMDPKAKPKAYGEVNVLSNVPDIELLEQDDDIGGSEDDESGDEAVYIS
SDDGNEDNDDEESQYTANDGSEDEDVLDEEGDENDSVDEYESDIDDANEDDSDDEDKGDT
EELETEEDDYNEEVSGSSKAGDNAGDGGNEDQKAKASKRKLSDFEGQLIAADTSLRALKR
LAEAKTSHASSDSVDGILSDEHFQRIKKLKAKKEAKTALAQQGFKIPSSDQLSFKRVDPS
KLEAHVRLRLSKEERLALVKAGREDRGQYQARTAIKQKKTGGLSNRQKEHKKYMPLAAKK
AKAQRSRQEKNKKKSRSGKQFRGKKAWKQ
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaatggtcagtggctcagcggagcctctctctgcatcgggtcggagctcagag
aagctgagcctcctatccctccaatccaaaatgaaaactgacccgcaaggctatgaaacg
gagctccatctcatccgcaaccaattctattccgctcttgagctctttcaacagcaagcg
gctctgaatttctcctccatcagtggcgtcggtgctgacccaactgtggctaaggacctc
agtgaccgtgccatgttcttggcccatgtcacgccgttctatcccaagcagctcgctgag
ttcccttccgatctcgccgcgtttctgaaatcatctgcaaggactcttccgtcagggctt
agattccatgccactcaagccgtcattctcctcgttaaccggaagattattgatataaag
gacactctatcgttgttcatggaattgcagacactagatgataggaatttgaggaaatta
gcattttctcatgttgttcatagcattagaagaatgaacaagaatcataagaatgaggcc
aagaatcgctcccttcagaatatcttgtttggcttattgcagcaagatgatgaagcaaaa
gcgaaaaggtctctaattactttatgtgaacatcatcgaagaaaggtttggtttgatgaa
aggacagcaaatgcaatttgtatggcatgttttcattcatcttctagaataatgattgct
gtgctctcttttctccttgattatgagaagattgaaaatgatgatgaggattcagatgat
ttaagtagtgaagatgaaatgatacaaaatccccgcgttgttatcagcaaagagacagtt
tacaaggcacaccataagggtacagctgctagcaagaagaaaaagaaagcgaaactacag
cgtgctattcgtagcatgaaaaggcagcaacgcctgtcatcagaaagtagcaattgtagt
tattattcacccctttatcatctgaaagatgcacagggatttgtagaaaagcttttttct
cgccttcaaacctgcaatgaacgatttgaggttaaaatgatgatgttgaaagtaattgct
agaacagttggccttcaccgtctgatattattaaatttctacccttttcttcaaagatat
gttcagcctcatcagaaagatatcactaatttactggcagcagcagttcaggcctgccat
gatatggttcctcctgatgcagttgagccattgttcaaacaaatagtaaaccaatttgta
catgatcgttcacgcccagaggccattgctgttggactgaatgtgataagggaaatatgc
ctgcgcatgcctttgttgatgactgaagatttgctacaagatcttgtattgtataaaaag
tcacatgagaaggcagtgtcagctgcagctcgctcactcattactttgtttagagaggtt
tgcccatcactgctggttaagaaggaccgaggccgtccaatggaccctaaggcaaaacca
aaggcatatggagaagtcaatgtccttagcaatgtccctgacattgaattattggaacaa
gacgatgacattggtggcagtgaggatgatgaaagtggagatgaggctgtatatattagt
tctgatgatggcaatgaagacaatgatgatgaagaaagccagtatactgcaaatgatggg
agtgaggatgaagatgtattggatgaagaaggtgatgagaatgacagtgttgatgaatac
gagagtgacattgatgatgccaatgaggatgacagtgatgatgaggataagggcgataca
gaggagttggaaactgaagaggatgattataatgaagaagttagtggttcttctaaagca
ggtgacaatgctggagatggtggaaatgaagatcaaaaggccaaggcaagtaagagaaaa
ttgtctgattttgagggtcaacttattgctgctgatacaagtcttcgagctttaaaaagg
ttggcagaggcaaagacgagccatgcttcgtcagactcagtggatggtattctctctgat
gagcatttccaaaggatcaagaaactaaaggctaagaaggaagcaaaaactgctttggct
caacaagggtttaagattccaagttctgatcaactaagtttcaaacgagtagatccctca
aagcttgaagcccatgtccgactcaggcttagcaaggaggaaaggctagcattggtaaaa
gcaggaagggaagacagagggcagtaccaggctcgaactgccatcaaacagaaaaagact
ggtggtttaagcaaccgtcagaaagagcacaagaagtatatgccgcttgctgcgaagaaa
gccaaagctcaaagatctcgacaagagaaaaataagaagaagtcacgttctggcaaacag
ttccgtgggaagaaagcttggaagcaatga
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