KEGG   Gossypium hirsutum (upland cotton): 107941459
Entry
107941459         CDS       T04793                                 
Name
(RefSeq) protein SDA1 homolog isoform X1
  KO
K14856  protein SDA1
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ghi03009]
    107941459
Ribosome biogenesis [BR:ghi03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    107941459
SSDB
Motif
Pfam: SDA1_HEAT SDA1_C SDA1_dom DUF29
Other DBs
NCBI-GeneID: 107941459
NCBI-ProteinID: XP_016730513
UniProt: A0A1U8MY89
LinkDB
Position
D12:62464855..62470174
AA seq 809 aa
MVSMVSGSAEPLSASGRSSEKLSLLSLQSKMKTDPQGYETELHLIRNQFYSALELFQQQA
ALNFSSISGVGADPTVAKDLSDRAMFLAHVTPFYPKQLAEFPSDLAAFLKSSARTLPSGL
RFHATQAVILLVNRKIIDIKDTLSLFMELQTLDDRNLRKLAFSHVVHSIRRMNKNHKNEA
KNRSLQNILFGLLQQDDEAKAKRSLITLCEHHRRKVWFDERTANAICMACFHSSSRIMIA
VLSFLLDYEKIENDDEDSDDLSSEDEMIQNPRVVISKETVYKAHHKGTAASKKKKKAKLQ
RAIRSMKRQQRLSSESSNCSYYSPLYHLKDAQGFVEKLFSRLQTCNERFEVKMMMLKVIA
RTVGLHRLILLNFYPFLQRYVQPHQKDITNLLAAAVQACHDMVPPDAVEPLFKQIVNQFV
HDRSRPEAIAVGLNVIREICLRMPLLMTEDLLQDLVLYKKSHEKAVSAAARSLITLFREV
CPSLLVKKDRGRPMDPKAKPKAYGEVNVLSNVPDIELLEQDDDIGGSEDDESGDEAVYIS
SDDGNEDNDDEESQYTANDGSEDEDVLDEEGDENDSVDEYESDIDDANEDDSDDEDKGDT
EELETEEDDYNEEVSGSSKAGDNAGDGGNEDQKAKASKRKLSDFEGQLIAADTSLRALKR
LAEAKTSHASSDSVDGILSDEHFQRIKKLKAKKEAKTALAQQGFKIPSSDQLSFKRVDPS
KLEAHVRLRLSKEERLALVKAGREDRGQYQARTAIKQKKTGGLSNRQKEHKKYMPLAAKK
AKAQRSRQEKNKKKSRSGKQFRGKKAWKQ
NT seq 2430 nt   +upstreamnt  +downstreamnt
atggtttcaatggtcagtggctcagcggagcctctctctgcatcgggtcggagctcagag
aagctgagcctcctatccctccaatccaaaatgaaaactgacccgcaaggctatgaaacg
gagctccatctcatccgcaaccaattctattccgctcttgagctctttcaacagcaagcg
gctctgaatttctcctccatcagtggcgtcggtgctgacccaactgtggctaaggacctc
agtgaccgtgccatgttcttggcccatgtcacgccgttctatcccaagcagctcgctgag
ttcccttccgatctcgccgcgtttctgaaatcatctgcaaggactcttccgtcagggctt
agattccatgccactcaagccgtcattctcctcgttaaccggaagattattgatataaag
gacactctatcgttgttcatggaattgcagacactagatgataggaatttgaggaaatta
gcattttctcatgttgttcatagcattagaagaatgaacaagaatcataagaatgaggcc
aagaatcgctcccttcagaatatcttgtttggcttattgcagcaagatgatgaagcaaaa
gcgaaaaggtctctaattactttatgtgaacatcatcgaagaaaggtttggtttgatgaa
aggacagcaaatgcaatttgtatggcatgttttcattcatcttctagaataatgattgct
gtgctctcttttctccttgattatgagaagattgaaaatgatgatgaggattcagatgat
ttaagtagtgaagatgaaatgatacaaaatccccgcgttgttatcagcaaagagacagtt
tacaaggcacaccataagggtacagctgctagcaagaagaaaaagaaagcgaaactacag
cgtgctattcgtagcatgaaaaggcagcaacgcctgtcatcagaaagtagcaattgtagt
tattattcacccctttatcatctgaaagatgcacagggatttgtagaaaagcttttttct
cgccttcaaacctgcaatgaacgatttgaggttaaaatgatgatgttgaaagtaattgct
agaacagttggccttcaccgtctgatattattaaatttctacccttttcttcaaagatat
gttcagcctcatcagaaagatatcactaatttactggcagcagcagttcaggcctgccat
gatatggttcctcctgatgcagttgagccattgttcaaacaaatagtaaaccaatttgta
catgatcgttcacgcccagaggccattgctgttggactgaatgtgataagggaaatatgc
ctgcgcatgcctttgttgatgactgaagatttgctacaagatcttgtattgtataaaaag
tcacatgagaaggcagtgtcagctgcagctcgctcactcattactttgtttagagaggtt
tgcccatcactgctggttaagaaggaccgaggccgtccaatggaccctaaggcaaaacca
aaggcatatggagaagtcaatgtccttagcaatgtccctgacattgaattattggaacaa
gacgatgacattggtggcagtgaggatgatgaaagtggagatgaggctgtatatattagt
tctgatgatggcaatgaagacaatgatgatgaagaaagccagtatactgcaaatgatggg
agtgaggatgaagatgtattggatgaagaaggtgatgagaatgacagtgttgatgaatac
gagagtgacattgatgatgccaatgaggatgacagtgatgatgaggataagggcgataca
gaggagttggaaactgaagaggatgattataatgaagaagttagtggttcttctaaagca
ggtgacaatgctggagatggtggaaatgaagatcaaaaggccaaggcaagtaagagaaaa
ttgtctgattttgagggtcaacttattgctgctgatacaagtcttcgagctttaaaaagg
ttggcagaggcaaagacgagccatgcttcgtcagactcagtggatggtattctctctgat
gagcatttccaaaggatcaagaaactaaaggctaagaaggaagcaaaaactgctttggct
caacaagggtttaagattccaagttctgatcaactaagtttcaaacgagtagatccctca
aagcttgaagcccatgtccgactcaggcttagcaaggaggaaaggctagcattggtaaaa
gcaggaagggaagacagagggcagtaccaggctcgaactgccatcaaacagaaaaagact
ggtggtttaagcaaccgtcagaaagagcacaagaagtatatgccgcttgctgcgaagaaa
gccaaagctcaaagatctcgacaagagaaaaataagaagaagtcacgttctggcaaacag
ttccgtgggaagaaagcttggaagcaatga

DBGET integrated database retrieval system