Gossypium hirsutum (upland cotton): 107941461
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Entry
107941461 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2-like
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107941461
03036 Chromosome and associated proteins [BR:
ghi03036
]
107941461
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107941461
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107941461
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
107941461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
Prok-RING_4
PHD
zf-RING_5
RING_XB3-XBAT31
TRAF3_RING
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
107941461
NCBI-ProteinID:
XP_040963708
LinkDB
All DBs
Position
D12:complement(62471428..62476023)
Genome browser
AA seq
665 aa
AA seq
DB search
MAHDSVQLPCDGDGACMRCKVTPLAEETLTCSTCATPWHVACLASPPETLASTLQWQCPD
CSGDPLPSAAGALDGTSSELFAAIRAIESDESLTEKEKARKRQELVSGRVEEDGDKEKKG
KEKESSFLDVLDGSLNCSFCMLLPDRPVTTPCGHNFCLKCFQKWIGQGKRTCAKCRSIIP
PKMASQPRINSTLVSVIRMAKLSKSNVAAGPMKVYHFVQNQDRPDKAFTTERAQKPGKAN
AASGKIFVTVPPDHFGPITAENDPARNQGVLVGECWEDRLECRQWGAHLPHVAGIAGQSN
YGAQSVALSGGYEDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSFDQKFEKMNEALRVSCK
MGYPVRVVRSHKEKRSSYAPEKGVRYDGIYRIEKCWRKVGIQGFKVCRYLFVRCDNEPAP
WTSDDHGDLPRPLPAIPELKKATDVFERKESPSWDFDEEDNRWRWKKPPPPSKKPVNAAD
LEERKRARKAIRQAHTTTVRERLLKEFSCLICRQVMNLPVTTPCAHNFCKSCFEAAFSGK
TAIRERSKGGRTLRSQKNVLHCPSCPTDISDFLQNLQVNRELMGVIESLKQKSEENQDAV
EELSEEQVDESEENADIGSGDSETAQKTKNPDPKDDLQNPPPDSDQKRTSKRMKVDTTQV
VADCE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgatagcgtccagcttccatgcgacggagatggcgcctgcatgcgctgcaag
gtcacccctctggcggaggaaaccctgacttgtagcacgtgcgcgactccttggcacgtg
gcttgcttggcttctcctcccgaaaccctagcttctacactgcaatggcagtgccccgac
tgttccggagatcctcttccttctgctgcgggcgccttagatgggacctctagcgagtta
ttcgcggcgataagggcaatagagtcggatgaatcgttgacggagaaggagaaggcgagg
aagaggcaggagctggtgagcgggagagttgaagaagatggggataaagaaaagaaaggg
aaagagaaagagagttcatttttggacgttcttgatggaagcttaaactgttcgttttgc
atgctgttacctgacagacctgttacgacaccttgcggccacaatttctgccttaaatgc
ttccagaaatggatagggcaagggaagcgtacttgtgcaaaatgtcgctcaataattccc
cccaaaatggcaagtcagcctcgtattaattctacacttgtatctgttataagaatggca
aagctatcgaaatcaaatgtagctgcagggcctatgaaagtttaccattttgtacaaaat
caagaccggcctgacaaggctttcactacagagagagcacaaaaacctggaaaagctaat
gctgctagtgggaagatatttgtgactgtaccacctgatcattttggaccaatcacagct
gaaaatgatccagctagaaatcagggtgtgcttgttggtgaatgttgggaagacagattg
gaatgccggcaatggggtgctcaccttccacatgttgcaggcattgctggtcagtcgaac
tatggtgctcaatctgtagctctctcaggaggttatgaggatgacgaggatcatggggag
tggtttctctacacaggaagtggaggtagagatcttagtggaaataagcggacaaacaag
gaacagtcatttgatcaaaaatttgagaagatgaatgaggctttgcgagtaagctgcaaa
atgggctatcctgtccgagttgtaaggtctcacaaagaaaaacgttcttcatatgcccca
gagaaaggtgtgagatatgatggaatttacagaattgaaaaatgttggagaaaagttgga
atacagggatttaaagtttgccgatatttgtttgtgagatgcgacaatgagccagcccct
tggacaagtgatgatcatggagatctacctaggcccttaccagccattcccgagttgaag
aaggcaactgacgtatttgagagaaaggaaagtccatcatgggactttgatgaagaggac
aatcgctggagatggaaaaaaccaccgcctcctagcaaaaagccagtgaatgcggctgat
ctcgaagaaaggaaaagggcaaggaaagctataaggcaagcacatactacaactgtaaga
gaaagactactcaaagagtttagttgtctaatctgtcggcaagttatgaatcttccagtt
acaactccttgtgcccacaacttctgcaaatcttgttttgaagctgcattttctggtaag
actgctattagagagagaagcaaaggtggccggacacttagatcacaaaaaaatgtgctc
cattgtccttcttgcccaaccgatatctctgattttcttcaaaaccttcaggtcaaccga
gaactaatgggtgtgatagagtcactgaagcaaaagagtgaggagaatcaggacgctgtt
gaagagttgagtgaggaacaggtggacgagtcagaggaaaatgcagacataggttctggc
gacagtgaaactgcccagaaaaccaagaaccctgatccgaaagatgacttgcagaatcct
cctcccgattctgatcagaaaagaactagcaagaggatgaaagtggatacgactcaagta
gtagctgactgtgaatga
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