Gossypium hirsutum (upland cotton): 107941828
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Entry
107941828 CDS
T04793
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107941828
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107941828
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GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
Baculo_LEF5_C
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
107941828
NCBI-ProteinID:
XP_016730936
UniProt:
A0A1U8MVS6
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Position
D09:51500269..51503164
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AA seq
366 aa
AA seq
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MERELLHLFDAAKKAADLAASDAVSSNAPEVSRCVDALNQLKDFPVTYDTLVSTQVGKKL
RPLTKHPREKIKTVASDLLELWKKIVIEETTKSKKNGTTSAVKVEKLPKPSAVKSEKLYN
TESVKVERSKGDSVKPIKVEKKESNGDTVMVDKRDRGDAGKIETIYKDERQAPNVKKQYQ
PPAGPPKLTSLVKCNDPLRDKFREILVEALSKVPSEADEDMLDQVNACDPIRVAVSVESV
MFEKMGKSNGAQKFKYRSIMFNIKDPKNPDLRRKVLLGEVKPERLITMTPEEMASDERQR
ENKEIKDKALFDCERAGAPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCVNCN
NHWKFC
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggagagggagctgctgcatttgttcgacgccgccaaaaaagctgccgatttggccgcc
tccgacgccgtttcctccaacgcccctgaagtttccagatgcgttgacgccttgaaccag
cttaaggatttccccgtcacttatgacactcttgtttctacacaggttggaaaaaagctg
cgacctctcactaagcatcctagagagaaaatcaagactgtggcttctgacttgcttgag
ttgtggaagaaaattgttattgaggagactaccaagagtaagaaaaatggcaccactagt
gctgtcaaggttgagaaacttcctaagccaagtgctgtaaagtctgaaaaactctacaat
acagaatctgtgaaggttgagagatctaaaggtgattcggtaaaacccatcaaagttgaa
aaaaaggaatcaaatggagacactgtaatggttgacaagagagaccgaggagatgctggg
aagattgaaacaatttataaggatgagaggcaagcaccaaatgtcaagaaacaatatcag
ccgcccgctggccctccgaagttgacatcattggtcaaatgtaatgatcctttgcgtgac
aaatttcgtgagattcttgtagaggccttgtctaaagttcccagcgaggctgatgaagac
atgctggatcaagtgaatgcttgtgaccctatccgggttgctgtatctgttgaatctgtg
atgtttgagaagatgggtaaatcaaatggcgcccagaaatttaagtacagatctataatg
ttcaacatcaaggatccaaagaatccagatttaaggaggaaggttcttctgggcgaagtg
aaacctgaaaggctcataactatgaccccagaggaaatggccagtgatgagaggcaacgt
gaaaataaagaaattaaagacaaggctctgtttgattgtgaacgtgctggtgcaccaaag
gccacgacagatcaatttaagtgtgggcgttgtggtcaacgcaagaccacttactatcaa
atgcaaacaaggagtgcagatgaacctatgacaacctatgtaacatgcgtaaactgcaac
aaccattggaaattctgttag
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