Gossypium hirsutum (upland cotton): 107941902
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Entry
107941902 CDS
T04793
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107941902
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
107941902
NCBI-ProteinID:
XP_016731019
UniProt:
A0A1U8MZL6
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Position
D11:4417635..4420053
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AA seq
592 aa
AA seq
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MFMAVESTLPTPVRTPASEKDAKALQFIEEMTKNVDSVQERVLREILGRNAETEYLKRFS
LNGATDRETFKSRIPVVTYEDIQPEIQRIANGDKSPIFSVHPISEFLTSSGTSAGERKLM
PTIHEELDRRQLLYSLLMPVMNLYVPGLDKGKGLYFLFVKAETKTPGGLLARPVLTSYYN
SDHFKTRPYDPFNVYTSPNEAILCVDSFQSMYAQMLCGLIMRDEVRRVGAVFASGLLRAI
HFLQNNWKQLAHDIATGTLNPKITDAPVRECMRKILKPNPELAQLVTIECYEENWECIIK
RIWPRTKYLDVIVTGAMAPYIPTLEYYSGGLPMACTMYASSECYFGLNLNPMCKPSEVTY
TIMPNMAYFEFLPHGSSTSCLVDLADVEVGKEYELILTTYAGLCRYRVGDILRVTGFHNA
APQFRFIRRKNVLLSIESDKTDEAELQNAIENASLLLKEFNTSVVEYTSYADTKQIPGHY
VIYWELLVKDSAIAPTDDVLNRCCLQMEESLNSVYRQSRVADNSIGPLEIRVVENGTFEE
LMDYAISRGGSINQYKVPRCVSFTPIMELLNSRVVSKHFSPDLPHWTPERRR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggctgttgaatcaactctcccgactccagtccgaactccggcttccgagaaa
gatgcgaaagctcttcaattcattgaagagatgacaaaaaatgtcgattcagttcaagaa
agggttttacgtgagatcctaggccgaaatgccgagactgagtatctcaaacggttcagc
ctcaatggagctacggaccgggaaacattcaagtctcgaatccctgttgtcacttatgaa
gatatacagcctgagattcaacgtatcgccaatggtgataagtcccctatcttttcagtt
catcccatttcagagtttctcactagttctgggacttcagctggagaaaggaagctgatg
ccaacaattcatgaagagttggatcgtcgtcaactcttgtatagccttcttatgcctgta
atgaacctctacgttccaggattggacaaagggaagggtctttatttcttgtttgtgaaa
gctgaaacaaagactcctggagggcttttggcacgcccagtcctcacaagctactacaac
agcgaccactttaagactcgcccatatgaccctttcaatgtttacactagccccaacgaa
gccatcctttgcgttgactcttttcaaagcatgtacgcccagatgctttgtggcttgatc
atgagggacgaggtccgtcgtgttggtgccgtttttgcctctggcctgcttagggccatt
catttccttcaaaacaactggaaacaactggctcatgacattgcaacgggaaccttaaac
cctaaaataaccgatgctccggttcgagaatgcatgagaaaaatcttgaaacctaaccca
gaacttgcccagttggttactatagaatgttatgaggagaattgggaatgtatcatcaaa
agaatttggcccagaactaagtatcttgatgttatcgtaactggagccatggctccatat
atccccacccttgaatattacagtggtggcttgccaatggcttgcacgatgtatgcttcg
tcagagtgttatttcggtctcaatctcaacccgatgtgcaaaccatccgaagtcacatac
actatcatgccaaacatggcctactttgagttcttgcctcatggatcatccacttcgtgc
ctagttgatctcgccgatgtcgaagtcggcaaagaatatgagctcatcctcaccacttat
gcaggattgtgccgctacagagtcggcgatatccttcgagtcaccggttttcacaacgcg
gccccacagtttcgtttcattaggagaaagaacgttttgttgagcatcgagtcagataaa
acggatgaggctgagttacaaaacgccatcgaaaacgcttctcttttgctgaaggaattc
aacaccagcgttgttgagtacacaagctacgccgacaccaaacaaataccgggtcactac
gttatttactgggaattactcgtcaaagactcagctattgcaccaaccgatgatgttttg
aaccgatgctgcttacaaatggaggaatccttgaactcagtttaccgtcaaagccgagtt
gctgacaactcaatcggcccactcgagataagagtagtggaaaacggcacgtttgaggag
ttaatggattatgcaatttcaaggggtggctccataaatcaatacaaagttccaagatgt
gtaagcttcactccaatcatggaacttctgaactcaagggtggtttctaaacatttcagt
ccagatttaccacactggaccccagaacgtcgccgttga
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