Gossypium hirsutum (upland cotton): 107941977
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Entry
107941977 CDS
T04793
Name
(RefSeq) ubiquitin C-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107941977
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107941977
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107941977
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107941977
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107941977
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107941977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Ubiquitin_2
HTH_CDT1
Nitroreductase
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
107941977
NCBI-ProteinID:
XP_016731100
UniProt:
A0A1U8MWA9
LinkDB
All DBs
Position
D07:complement(17107662..17123209)
Genome browser
AA seq
1117 aa
AA seq
DB search
MTVMAPAPIDQQEDEEMLVPQSDLTDNHQPMEVVAQPEAANTVENQPVEDPPSSRFTWRI
ENFSRLNAKKHYSEVFVVGGYKWRILLFPKGNNVDHLSMYLDVADSASLPYGWSRYAQFS
LAVVNQIHNKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPCRGYLVNDTLIVEAEVVV
RRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGS
IPLALQSLFYKLQYSDSSVATKELTKSFGWDTHDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCHDVYASFDKYVEVERLEG
DNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
DGGKYLSPDADRRVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDM
KRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEH
LRERLKKEQEEKEHKKKEKAEAHLYTIIKVARDDDLAGQIGKDIYFDLVDHDKVRSFRIQ
KQITFNVFKEEIAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPLEETQSVGTLREVSNK
VHNAELRLFLEVELGLDLRPIAPPDKTKEDILLFFKHYNPEKEELRFVGRLFVKSTGKPI
EILSKLNKMAGYAPDEEINLYEEIKFEPSVMCEPIDKKITFRASQLEDGDIVCFQKSLPV
ESTEQFRYPDVPSFLEYVHNRQIVHFRSLEKPKEDDFCLEMSRLYTYDDVVERVAQQLGL
NDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHATKDEVVIHTIRLPKQSTVGDVINDLKTKVELSHPDAELRLLEVFYHKIYK
IFPPSEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFTKETAQNQMQILNFGEPF
FLVIHEGETLAEIKVRIQKKLQVPDEDFAKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVY
GAWEQYLGLEHSDNAPKRAYAANQNRHTFEKPVKIYN
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgactgttatggcccctgcccccatcgatcaacaagaagatgaggaaatgctcgtccca
cagtctgatttgaccgacaatcaccagcccatggaagttgtagcgcaacccgaagctgca
aatactgtggaaaatcaaccagttgaggatcctccttcatcaagattcacttggaggatt
gaaaacttctctaggttaaacgctaagaagcattattctgaagtcttcgttgtcggtggt
tataaatggcgaatactgctatttccaaagggaaacaatgtggatcatttgtctatgtat
ttggatgttgctgactcagcaagcttaccctatgggtggagtagatatgcccagttcagt
ttggcagtagttaatcaaattcataataaatattctatcagaaaagacacacagcaccag
ttcaatgcacgagaaagtgattggggttttacatcctttatgcccctcggcgagttatat
gatccttgcagagggtatcttgtgaatgacactttgattgttgaagcagaggtggttgtc
cgcaggattgttgattactggacatatgactcaaagaaggaaactggttatgttggactt
aaaaatcaaggagcaacatgttacatgaattctctgcttcaaactctgtatcacattcct
tacttcaggaaggcagtgtatcatatgcctacaactgagaatgatatgccatcaggaagc
atccctcttgctctgcagagtttattttacaaactccagtacagtgacagcagtgttgca
acaaaagagctgaccaaatcttttggatgggacacacatgattctttcatgcagcacgat
gttcaagaacttaatagagttctgtgtgaaaaacttgaagataaaatgaagggaactgtt
gtggaaggcaccatacagcagttgtttgaggggcaccatatgaattacattgagtgcatt
aatgtggattataaatctacaaggaaggagtcattttatgatcttcagcttgatgttaaa
ggctgtcatgatgtatacgcttcttttgacaagtatgtagaggttgagcgccttgaaggt
gataataaatatcatgccgaacaatatggcttgcaggatgctaagaagggtgtcttgttt
attgacttccctccggtccttcagcttcagcttaagcgatttgaatatgattttatgcgg
gacactatggtcaagattaatgatcgctatgagttccctttgcaacttgaccttgaccga
gatggtggaaaatacttatcaccagatgctgataggagagtccgcaatctttatacgctt
cacagtgtcctcgttcacagtggtggggtgcatggtggacattattatgcatttatcagg
ccgactctttctgatcaatggtataaatttgatgatgaaagagtaacgaaagaagatatg
aaaagggcattggaggagcagtatggtggtgaagaagagttaccacagacaaatccagga
ttcaataatactccttttaaatttaccaaatactcaaatgcatacatgctggtgtatata
cgtgaaagtgacaaagacaagataatatgtaatgtggatgagaaggatattgccgaacat
cttagggagaggttgaagaaagaacaagaagagaaggagcataagaaaaaagagaaggca
gaggcacacctttacactattataaaggttgcacgagatgatgatcttgcagggcaaatt
gggaaggatatatattttgatcttgtggatcatgataaagtcaggagttttcgaattcag
aagcagataactttcaatgtgtttaaggaagagattgctaaagagtttggcataccagtg
caatttcagcgtttctggttgtgggccaagcgtcaaaatcatacataccgtccaaaccga
ccattgacacctttggaggaaacacaatctgttggaacactgcgggaggtatcaaataaa
gttcacaatgcagaattgaggttgttcttggaggttgagcttggactggatttacgccca
attgctccaccggataagacaaaggaggatattttacttttctttaagcactataatcct
gagaaagaagagcttcgctttgttggaaggctgtttgtgaaaagcactggcaagccgatt
gaaattttatcaaaattaaacaaaatggcaggatatgctcctgatgaagagatcaacctt
tacgaggaaattaagtttgagcccagtgttatgtgtgaacccattgacaagaaaatcaca
ttccgagctagccagcttgaggatggtgacatagtttgctttcaaaagtctcttcctgtt
gaaagcactgaacaattccgctatccagatgttccttcatttttggaatatgtgcataat
cgccaaattgtacactttcggtctttggagaaacccaaggaagatgatttttgtcttgag
atgtcaaggctttatacctatgatgatgttgttgaaagagtagctcagcaacttggtttg
aatgatccgtcaaaaatcaggcttacatctcacaattgttactctcagcaacccaaacct
cagcctattaagtatcgtggggtggatcatttgtctgacatgctggtccactacaatcag
acttctgatattttatactatgaagttttagacatccctctaccagaattacaaggtttg
aaaaccttgaaggtagcctttcatcatgctactaaggatgaagttgttatccatacaatt
aggcttccaaaacagagcactgtgggcgatgtgattaatgatcttaagacaaaggtagag
ttgtctcatcctgatgcagaactgcggttgcttgaagttttctatcacaagatctacaag
attttcccacctagtgagaagattgagaatataaatgaccagtactggacattacgggca
gaagagattccagaagaagagaaaaatcttggtccaaatgatcgcctaattcatgtttac
cacttcactaaagaaactgctcagaaccagatgcaaattctgaattttggagagcccttt
ttcttggtgattcatgaaggtgagactttggctgaaataaaagtccgaatacaaaagaag
ctgcaagttcctgatgaggactttgctaagtggaagtttgcattcctctcacttggccgg
ccggagtaccttcaagattctgatattgtatctagtcgttttcagagacgagatgtttat
ggtgcttgggagcagtatcttgggctggagcactctgacaatgctccgaaaagagcttat
gctgctaatcagaaccggcacacctttgagaagcctgttaaaatatacaattag
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