Gossypium hirsutum (upland cotton): 107942209
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Entry
107942209 CDS
T04793
Name
(RefSeq) protein NPGR2
KO
K21843
tetratricopeptide repeat protein 7
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107942209
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
107942209
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_11
TPR_17
TPR_12
TPR_16
TPR_10
ARM_TT21
TPR_9
TPR_CcmH_CycH
TPR_Slam
TTC7_N
TPR_15
TPR_MalT
ARM_TT21_C
Vps39_1
Motif
Other DBs
NCBI-GeneID:
107942209
NCBI-ProteinID:
XP_016731329
UniProt:
A0A1U8N0H4
A0ABM2ZRV0
LinkDB
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Position
D02:6010459..6014806
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AA seq
732 aa
AA seq
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MAVKDWINKRGFHIRGGFQKMMRCIWSGQQLRVDDTNASSESLATRDYSVSGYSSRAGEM
VETKADSSNIEEAESSLRESGYLNYEEARALLGRLEYQKGNIEGALHVFEGIDVSAVTSK
MKVTLSRRCEQNRRRSESEAAPAMSMHAISLLLEAIFLKAKSLQHLGRFGEAAQSCKIIL
ETVESALPDGLPDNFSTDCKLQEILNKAVELLPELWKLAGDPQEAILSYRRALLYYWNLD
TGTKAKLEKEFAVLLLYSGAEASPLTLRAQMEGSFVPRNNVEEAILLLLILLRKFLLKRI
GWDPSILDHLAFALSVSGELRALAHQVEELQPEIMERKEQYRTLALCYYGEGEEIIALNL
LRNLLNSRDNPDCVLELLLASKICGENMNYIEEGTTWARKALVGLNGRCWQMVSKANCLL
GVLLSAQSRMVSSDSQRNLQQSKTIEVLETAEKLMKESDPYIVFHICLENAEQRKLDVAL
HYAKQLLKLEAGSNVKGYVLLARILSAQKRFVDAETVINAALNQTGKWDQGELLRTKAKL
QIAQGQLKNAVETYTHLLAILQVQHKSTGNGKKLLKTKGKWDRGLEMETWHDLANVYISL
SQWQDAEVCLSKSKAISPFSATRWYSTGILNEARGLHQEALRSYKKALDVNPTHVPSLIS
TACILRQLGGQSMPIVRSFLMDALRLDRTNPAAWYNLGLLYKADVSASALEAAECFEAAA
VLEESAPIEPFR
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcggttaaggattggataaacaagcgaggattccatattcgaggggggtttcaaaaa
atgatgaggtgtatatggtcaggacagcaattaagagttgatgatactaatgcttcttcc
gagtcgctagcgactcgggactattcagtgagtggttactcatctcgagcaggcgagatg
gtggagactaaggctgatagtagtaatatcgaagaagctgagtcatcgcttcgcgagagt
ggttatctgaactatgaggaagcaagggcattattagggaggctcgagtatcaaaaggga
aatatagaaggtgcacttcatgtatttgaaggaatagacgtttctgcagtgacttcaaag
atgaaagttaccctttcgagaagatgtgaacaaaaccgacgccgctcggaaagtgaagct
gctcctgccatgtctatgcatgccattagcttacttcttgaagctattttcttgaaagca
aaatcattgcagcacctcggaaggtttggagaggctgctcaatcgtgcaaaattattttg
gagactgttgaatctgcgttgcctgatggcctgccggacaacttctctacggattgtaaa
ttgcaggaaattttgaacaaagctgtggaattgcttccggagctatggaaacttgccgga
gatccccaagaagccatattgtcgtaccggcgggctctcctctattactggaatcttgat
accggaaccaaagcgaaactcgaaaaagaatttgcagtgttgcttttatatagcggtgct
gaagcaagccctctaaccctccgtgcgcagatggaaggatcatttgtgccgaggaacaat
gttgaagaggccattcttttattactaattctacttagaaagtttcttctcaaaaggatc
ggatgggatccgtcgatattggatcatcttgcttttgcgttatctgtttcgggggaacta
agagccttagctcatcaggttgaagaattgcagcccgagatcatggaaagaaaagaacaa
tatcgtacgttggctctctgctattacggggaaggtgaggagataattgctttgaatctt
ttgcggaatcttttgaatagccgagacaatccggactgtgtcctggaattgttgctagcc
tcgaaaatttgtggggagaatatgaattatatcgaggaagggacaacttgggcaaggaaa
gctcttgtcggattgaatggtaggtgttggcagatggtgagcaaagcaaactgcttactg
ggagttctattatcggctcagtcaaggatggtttcttccgattctcagagaaatttgcag
cagtccaaaacaattgaggtactcgaaactgcagaaaagctgatgaaagaaagtgaccca
tacatcgtattccatatttgcctagaaaatgctgagcagaggaagttggatgttgcactt
cactatgcaaagcagctcttgaaacttgaagcagggtctaatgttaagggatatgtcctt
ttggctcggatcttgtcagctcaaaaacggtttgttgatgcggagacagtaattaatgct
gctcttaaccaaaccggaaagtgggaccaaggagaattgttgagaaccaaggctaaactt
cagattgctcaagggcagttaaaaaatgcagttgagacatatactcatcttcttgccatt
ctccaagttcagcataaaagcacgggaaacgggaagaaacttctaaagacaaaggggaag
tgggatcgaggcttggaaatggaaacatggcacgatctagctaacgtgtacataagcttg
tcacagtggcaggatgccgaagtctgtctctccaaatccaaggctatcagtcctttctcc
gctactagatggtactctacaggtatattgaacgaagcgagagggcttcatcaggaagca
ctgagatcatacaagaaagcattagatgtaaatcccacacatgttccaagtttgatatcc
actgcttgcattctcagacaacttggtggtcaatcaatgcctattgttagaagttttcta
atggatgcccttcgactcgatcgaaccaacccagcagcctggtacaatctcgggttgctt
tataaagccgatgttagtgcatcagccctggaggctgccgaatgttttgaggctgctgca
gttcttgaagaatctgcaccaattgaaccctttagataa
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