Gossypium hirsutum (upland cotton): 107942318
Help
Entry
107942318 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107942318
KO
K21437
ankyrin repeat domain-containing protein 13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107942318
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
107942318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANKRD13_C
Ank_2
Ank
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
107942318
NCBI-ProteinID:
XP_016731457
UniProt:
A0A1U8MX96
LinkDB
All DBs
Position
A09:80791927..80796642
Genome browser
AA seq
650 aa
AA seq
DB search
MAGIDVSKYAHSAVHKAVATKDYAGLKRILAALPHLGNPTEIQTEAASLAEEEKADAISA
VIDWRDAPNRDTPLHLAVKLGDETATEMLMCAGADWSLQNEQGWSALQEAICNREEAIAM
IIVRHYPPLAWAKWCRRLPRLVGTMRRMRDFYMEITFHFESSVIPFISRIAPSDTYKIWK
RGANLRADMTLAGFDGFRIQRSDQSILFLGDGSEDGKVPPGSLCMISHKDREVINAFDGA
GSLATDEEVRQEVAAMSQTNIFRPGIDVTQAVLLPQVTWRRQEKTEMVGAWKAKVYDMHN
VVVSIKSRRVPGAMTDDEFFAASNGNETESEELDEILTEDERRQLEVALKLDSSEISNEN
GDGIIGHRHSCYESREIPIEETNGYKSVETKQEKKGWFGGWRKREPKHEAQRKIVPPRSS
LSVDEKVSDLLGDSPSGNQIKPGRHSVEIVARDDHRRTRDSRTTSTSSESGNRRKEIGRE
NEYKKGLRPVLWLSPNFPLQTEELLPLLDILANKVKAIRRLRELLTTKLPAGTFPVKVAI
PVVPTIRVLVSFTKFEELQPVDEFSTPPSSPSVGRESPAVTHVTGSSWFQWIKAPYHRPS
SSNHSHNKIENLQDPFAIPQDYTWITAEAKKKKMQEKSKSKKGKSQNHLK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtattgatgtttctaagtatgcacatagtgctgtgcacaaggctgttgctaca
aaggattatgctggtcttaagaggatactcgcggcgctcccacatcttgggaatccgact
gagattcaaactgaagcagcctcattggctgaggaagagaaggctgatgcgatctctgcc
gtgattgattggcgcgatgctcctaacagggatactcctcttcacttagctgttaagctt
ggcgatgaaactgcaaccgaaatgcttatgtgtgctggtgctgattggagtttgcaaaat
gaacaaggatggagtgcactccaagaagcgatttgtaatcgggaagaagctattgctatg
attattgttcggcattacccgccattggcatgggcaaaatggtgtaggaggttgcctcgc
ttggtgggaactatgcgaaggatgagagacttttacatggaaatcacattccattttgag
agttccgtgatacctttcatttccaggattgctccttcggatacatataagatttggaag
aggggtgcaaatctgagagctgatatgactttggctggatttgacggattcagaattcaa
cgttcagatcagagtattcttttccttggtgatggttccgaggacgggaaggttcctcct
ggatcactatgtatgatctctcataaggatagagaggtgataaatgctttcgatggtgct
ggttctctagcaactgatgaagaggttcgacaagaagtggctgcaatgtctcaaactaat
atattcaggcctggtatagatgtgacacaggcagttcttttgccacaagtaacatggagg
agacaagagaaaactgaaatggtgggtgcttggaaggctaaggtgtacgatatgcacaat
gttgttgttagcatcaaatctaggagggtgcctggtgccatgactgatgatgagttcttt
gcagcttccaatggaaatgaaacagaaagtgaggagcttgatgagatcttgacagaagat
gaaaggagacaacttgaagttgctcttaagttggattcttcagaaatatccaatgagaac
ggggatggcattattggtcatcgccatagttgttatgagtccagggaaatccctatcgaa
gagaccaatggttataaaagtgtagagactaagcaggagaagaaaggatggtttggtgga
tggaggaaacgggagccgaagcatgaagcgcagaggaagattgtgccacctagaagttct
ctttctgtagatgagaaggtgagcgacttgcttggagactctccatctgggaatcagata
aaacctggtaggcattctgtggagattgtggcaagggatgatcatcggaggacaagagat
tcacgaacaacttccactagttcagaaagtggtaatcggcgcaaggagattggtcgggag
aatgagtataagaaagggttgaggcctgttctttggctttctccaaacttcccgctgcaa
actgaagaactcctgccattgctagacattcttgcaaataaagttaaggcaattcgtcgg
ttaagggaactgctcactacaaagcttccagctggaaccttccctgtcaaggttgcaatc
ccagtggttccaacaatcagggtattggtttctttcaccaagtttgaagaactacagcca
gtggacgagttctctacacccccttcaagccccagtgttgggcgagaaagccctgcagtg
acacatgtgacaggttcatcctggtttcagtggataaaggcaccgtatcatcggccgagc
tcatccaatcatagccacaacaagatagaaaatcttcaagatccatttgcaataccccaa
gattatacatggatcacagctgaagcaaagaaaaagaagatgcaagagaagagcaaatca
aagaaaggtaagagtcagaaccatttgaagtga
DBGET
integrated database retrieval system
