Gossypium hirsutum (upland cotton): 107942377
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Entry
107942377 CDS
T04793
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107942377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107942377
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
107942377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Motif
Other DBs
NCBI-GeneID:
107942377
NCBI-ProteinID:
XP_016731519
UniProt:
A0A1U8N118
LinkDB
All DBs
Position
D12:complement(1575335..1584674)
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AA seq
1728 aa
AA seq
DB search
MSAPQTLGGPSRCGRVLGPSLDKIVKNAAWRKHSHIVSSCKSALDKLDTLSDSALSDPSS
PLLGLSSSDADFVLNPILLALDSNYAKLADPALESLFKLFSLGLVRGEIESNIPNSILYK
IVQSVCKVGGIGDESIELAVLRVLLSAVRCPCVLIRGDCLLHVIRTCYNVYLSALNGTNQ
VCAKSVLAQIVLIVFTRAEEDSMDVSTKTVPVSELLEFTDKNLNEGSSIYYCQKFVSEVV
NASEGVPDLKFSQPITGPELRNGESKVSNGEEKDGVEEEETKEGVESSSDGVTSKIREDG
FLVFKYLCKLSMKFSSQENPDDEILLRGKTVSLELLKVIMNNGGSIWHTNERFLNAIKQY
LCLSLLKNSALSVMSIFQLLCSIFMSLITKYRSGLKSEIGIFFPMLILRVLENILQPSFV
QKMTVLNLLEKIVGDPQIIIDIFVNYDCDVDSTNIFERIVNGLLKTALGPPSGSTTTLSA
VQDVTFRHESVKCLVGIIKSMGAWMDGQLKIGHSDSPKSFENDTLAESHSTSTAEDGTLA
DCELHPEMNSELSDAATVEQRRAYKIELLKGVSLFNRKPSKGIEFLINTRKVGNTPEEVA
SFLKKNTTGLNETMIGNYLGERGEFALKVMHAYVDSFNFKSMDFGEAIRFFLRGFRLPGE
AQKIDRIMEKFAERYCKCNPNSFTSADTAYVLAYSVIMLNTDAHNNMVKDKMTKSDFIRN
NRGINDGKDLPEEYLGALYDQIVKNEIKMNADSSVPQSKQENSLNKLLGLDGILNLVSWK
QTEDKPLGANGLLIRHIQEQFKAKSGKSESVYHVVSDVSILRFMVEVCWGPMLAAFSVTL
DQSDDRLATTHCLLGFRHAVHVTAVLGMQTQRDAFVTSVAKFTFLHCAADMKQKNVDAVK
AIITIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLSVSNTETDEKMAKSAG
LQSLKNKGTLQNLAVMAVVRGGSYDSTSVGVNNSGLVSPEQINHFIANLNLLEQIGSFEL
NHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWS
RMWIVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMW
KSNSTEIRELIVRCISQMVLSRVRNVKSGWKSVFSVFTAAAADEHKNVVLLAFETMEKIV
REYFPYITETEAATFTDCVRCLIKFTNSRFNSDVSLNAIAFLRFCAFKLAEGGLVCTDKS
SDDGSSVSTVIKDDSGVQSFTDIDDPGSYWGPLLTGLSKLTSDSRLAIRKSSLEVLFNIL
NDHGHLFSQTFWLGVFSSVVLPIFDGVCEKRDKALQTEQDSPTAESPHRDAITWDTETSA
VALQCLVDLFISFYDVLRPRLSDVVCILTRYLRSSIQGPASTGVAALSHLTGELGSRLSE
DEWQEILLALKEAAMSTLPGFKKLLTTMDDIKVPHNSQSYSNTETSSDHGLTNDDLEDDN
LQNVAYVVSRTKSHISVQLLILEVVTDMYRTHLQFLSAANINIIVEIFSSISSHALQLNS
ETTMQKKIQIACSILELSEPPMIHFEKEAYQNYLDFLQYLVKKNLSISKEMNLELLLVAV
CEKIMQIYLNCTTVNHNVQQKSGDKVVVVTHWTLPLSSAKKEELAARTPLLVSALRALSG
LERDSFRKYISNVFLLLVDLVQSEHSSGEVQRVLSNIFQSCIGTIIMQ
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctccccagacgctcggcggtccttcccggtgcggccgcgtcctcggcccatcc
ctcgacaagatcgtcaaaaacgccgcttggcggaaacactctcacatcgtttcctcctgc
aaatccgccctcgacaagctcgacaccctttccgactccgccttatccgatccctcttct
cctctactcggcctttcctcttccgacgccgactttgtcctcaatcccatcctccttgct
cttgactccaattacgccaaactcgctgatcccgccctcgaatccctcttcaagttattc
tcccttggcctcgttcgcggtgagattgagagcaacatccccaattccatcctctataaa
attgtccaaagtgtgtgcaaagttggtggcattggcgacgaatcgatagagcttgctgtg
ctacgtgttttactctccgccgttcgatgcccctgcgttttgatccgtggtgattgcttg
cttcacgtcattagaacttgttacaatgtatatttaagtgctttaaatggaaccaatcag
gtctgtgctaagtccgttctagctcagattgtgcttattgtatttacccgagcagaagaa
gattccatggacgtttctaccaaaacagtgccggtgagtgagcttttagagtttactgat
aagaatttaaatgaagggagttcaatttattattgtcagaaatttgttagcgaggttgtg
aatgctagtgaaggggttccagatttgaagttttcgcagccgattactggtccggagttg
cgaaatggtgagtctaaggtgtcgaatggggaagagaaggatggagttgaggaggaagag
acgaaggaaggggtcgaatcgagttctgatggtgttactagtaaaattagggaggacgga
tttcttgtttttaaatatttgtgcaagttatctatgaaattttcgtcacaggagaatcct
gacgatgagatccttttgagagggaaaacagtgtctttggaactcctcaaggtgattatg
aataatgggggttcaatttggcacacaaatgagaggtttcttaatgcaattaagcagtat
ctctgcttatcattgttaaaaaacagtgctttgtcagtgatgtcaattttccagctcctg
tgttctatttttatgagtttgatcacaaagtatagatcagggttgaaatctgaaattgga
attttctttcccatgctaatcctccgagttctagagaatattctccagcctagttttgta
cagaaaatgaccgtccttaacttgctggaaaagattgttggggatccacagattatcatt
gatatatttgtgaactatgactgcgatgtcgattcaacaaacatatttgaaaggattgtc
aatggccttctgaaaactgctttagggcctccatctggttcaaccacaactttgtctgca
gtccaggatgttacttttcggcatgaatcagtgaagtgtttagttggcatcattaagtca
atgggagcttggatggatggacagctgaagataggtcattctgactcacctaagagcttt
gagaatgacactttagctgagagccattcaacctcaactgctgaagatggaactcttgct
gattgtgagttgcatccagaaatgaattctgaattatcagatgctgctacagttgagcaa
cgccgagcttacaagattgaactcctgaaaggcgtctcattgtttaacaggaagccatcc
aaaggcatcgagtttcttataaacaccaggaaggttggcaacactccagaggaagtggca
tcttttctaaagaaaaacactactgggctgaatgaaaccatgatcggcaattatttgggt
gaaaggggagaatttgctttgaaagtcatgcatgcttatgtagattctttcaatttcaaa
tctatggattttggtgaagcaattaggttcttcctacgtggctttaggttgccaggcgag
gcacagaaaattgaccgcatcatggagaagtttgctgagcgctattgtaaatgcaatccg
aactcatttactagtgcagatactgcctatgtactggcatactctgtcataatgctcaac
actgatgctcataataacatggtcaaagataagatgactaagtctgatttcatccgaaac
aaccgaggaataaatgatggcaaggatttacctgaggagtatcttggtgctctttatgat
cagattgtgaaaaatgaaattaagatgaatgctgattcttctgttcctcaaagcaagcaa
gaaaacagcttaaataagttgttgggtttggatggtatactgaatctggttagttggaag
caaaccgaagataagccattgggtgcaaatggtctccttataagacatattcaagagcag
tttaaggcaaagtctggaaaatcagagtctgtttatcatgttgtttcagatgtatcaatc
ttgaggtttatggtggaggtctgctggggacccatgctggctgcatttagtgtcactctt
gaccaaagtgatgatagacttgctaccactcattgcttactgggctttcgacacgctgtg
catgtaactgcagtattgggcatgcagacacagagagatgcttttgtcacatctgtggca
aagttcacttttctccattgcgctgcagatatgaaacaaaagaatgttgatgctgtaaag
gcaataataactatcgccattgaagatggtaaccatcttcaggaggcctgggagcatata
ttgacatgcctgtccagaattgagcatttgcaactgttgggagaaggtgccccaactgat
gcatcttttttatctgtgtcaaacactgaaacagatgaaaagatggcaaaatctgcaggt
cttcaatctctgaagaacaaaggaaccctccagaatctagctgtaatggcagttgtccga
ggaggttcttatgatagcacctctgttggagtcaataattctgggttggtatctcctgag
cagattaatcacttcatcgcaaacttgaatttattggagcagattggaagttttgagttg
aatcatgtgttcgcacatagtcaaaggttaaacagtgaagcaatagtggcatttgtgaaa
gccctttgcaaggtttctatatcggagttgcagtctccaacagatccccgtgtttttagc
ctcacaaaactagttgaaattgcgcattacaatatgaaccgcatcagattagtttggagt
cgcatgtggattgttctctctgatttctttgtttcggttggattgtctgagaatttatct
gtagcaatttttgtaatggattcgttgcggcaacttgctatgaaattcttagaacgtgag
gagctcgcaaattacaatttccagaatgaatttttgagaccatttgtgattattatgtgg
aaaagcaactctacagaaataagggaattaatagttcggtgtatttctcagatggtcctc
agccgcgtcagaaacgtgaaatcaggatggaaaagtgttttttcggtgttcacagctgct
gctgctgatgagcataagaatgttgtcttgctggcttttgagacaatggaaaaaatagtg
cgagaatactttccttatataactgagacagaggctgctacatttactgattgtgttaga
tgcctcatcaagttcacaaatagcaggtttaacagtgatgttagccttaatgctattgca
tttctgcggttctgtgcctttaaacttgccgagggaggacttgtttgcactgataagagc
tctgatgatggttcatctgtttcaactgtaattaaggatgattcaggtgtacaaagtttc
acggatattgatgatcctggttcttattggggccctctgctaacaggtttatcaaaacta
acatctgactcgagattagctattcggaagagttcgttggaagtgcttttcaacatcctg
aatgatcatggtcatcttttctcacagacattctggcttggtgtttttagttctgttgtt
ctccctatatttgatggtgtttgtgaaaagagagacaaggctctacaaactgagcaggat
tcaccaactgcagaatctcctcatcgcgatgcaattacatgggacactgaaacttctgcc
gtggcattacagtgtttagtagatttatttattagtttctatgatgtattgaggccccgg
ctatcagatgtggtatgcatactgacaagatacttaagaagttcaatacagggtcctgca
agcactggggttgcagcattgtctcatttgacaggagagttaggaagcagactttcagaa
gatgaatggcaagaaatattactagcattaaaagaagcagccatgtctactttgccaggg
tttaagaagcttttgacaaccatggatgacatcaaggtgccacacaattctcaatcctat
tctaatactgaaactagttctgatcatggattgaccaatgatgatcttgaggatgataat
ctacaaaatgtggcttatgtggtttcgaggacgaagagtcatatttccgtccagctactc
attttagaggtcgtgactgatatgtacagaacacacctacaattcttgtcagctgccaac
ataaatatcattgttgagatattttcctccatttcatcacatgctctgcaactgaactcc
gagacaacaatgcaaaagaaaatacagatagcgtgctcaatcttggagctctcagaacct
cccatgattcactttgagaaggaggcttatcaaaattacctcgacttcctccaatattta
gtcaaaaagaatctgtccatttccaaggagatgaacctagaattactgcttgtagcagtg
tgtgaaaaaataatgcaaatatacctcaactgtactactgtgaaccataatgtgcaacag
aaatcgggggacaaggtggtagtggtgactcattggactcttccattaagttcagccaag
aaggaagaattggcagctagaactccattacttgtgtcagcattgagggcattgagtggg
ttggaaagagattcctttagaaaatacatatcgaatgtctttcttctgttggtagatctt
gtccagagtgagcatagctcgggcgaagttcaacgggttctgagcaacatattccagtca
tgtataggtacaataataatgcaatga
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integrated database retrieval system
