Gossypium hirsutum (upland cotton): 107942432
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Entry
107942432 CDS
T04793
Name
(RefSeq) diaminopimelate decarboxylase 2, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00300
Lysine biosynthesis
ghi00470
D-Amino acid metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi01230
Biosynthesis of amino acids
Module
ghi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
107942432
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
107942432
Enzymes [BR:
ghi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
107942432
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Pox_Rif
Motif
Other DBs
NCBI-GeneID:
107942432
NCBI-ProteinID:
XP_016731588
UniProt:
A0A1U8N1D5
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All DBs
Position
A13:3925729..3930674
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AA seq
488 aa
AA seq
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MAATTHHHLSHAASLPKTLNHPLKQNPFSQLPVLPLRASKNLFRRQSLSLKAVLSQNPAK
TLNPTFQHCFTKSLDGFLYCEDTKVQDIMEKVEKRPFYLYSKPQITRNVEAYKEALEGLK
NSIIGYAIKANNNLKILQHLRKLGCGAVLVSGNELKLALHAGFDPTKCIFNGNGKILEDL
ILAAQEGVFVNVDSEFDLENIVTAAKVAGRKVNVLLRINPDVDPQVHPYVATGNKNSKFG
IRNEKLQWFLDAVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVNYIDEIRAQGFEV
DYLNIGGGLGIDYYHSGAVLPTPRDLIDTVRELVLSRNLNLVIEPGRSLIANTCCLVNRV
TGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPDADVSTFDVVGPVCESADF
LGKERELPTPAKGTGLVVHDAGAYCMSMASTYNLKMRPPEYWVEEDGSVTKIRHGETFED
HIRFFEGL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactactcaccaccatctctctcacgccgcatctcttcccaaaaccctaaac
catcctttgaagcaaaacccattttcccaactccccgttttgcccctcagggcctccaag
aatctctttaggcgccaatctctctccctcaaagctgtgctctcccagaaccctgctaaa
accctcaaccccacttttcaacactgcttcacgaaatcccttgatgggttcctctactgt
gaggataccaaggttcaggacatcatggagaaagtcgaaaagaggcccttttatttgtac
agtaagcctcagattactaggaatgtggaagcttataaggaggctcttgaaggcttgaag
aattccatcattggttacgccatcaaggcgaataataatttgaagattttgcagcatttg
aggaagttaggttgtggtgctgtgcttgttagtggcaatgaactcaagttggctcttcat
gccggctttgatcctactaagtgtatatttaatggaaatgggaagatcttggaggatttg
atcctagctgcccaagaaggtgtttttgtgaatgtggatagtgaatttgatctggagaat
attgttacagctgcaaaagttgctggcaggaaggttaatgtgttgcttcggatcaacccg
gatgtggatccacaggtccatccatatgtcgctactgggaacaagaactctaaatttggt
attaggaatgagaagctgcagtggtttctggatgccgtaaaggcacaccctaatgagcta
aagcttgttggggcccattgtcatcttggttcaaccattaccaaggtggatatattcagg
gacgctgctgttctcatggtcaactacattgatgaaatccgtgcccaaggtttcgaggta
gattatttaaacattggaggtggtttggggatagattactaccatagtggtgccgtcctt
cccacaccgagagatctcattgacactgtcagagaattggtcctctcaagaaatcttaac
ctcgtcattgaaccagggagatcactgattgcaaacacttgctgcttagtgaatcgtgtc
actggagtcaaaactaatggaacaaaaaatttcattgtcattgatggcagtatggctgaa
cttatccgtcctagtctttatgacgcttaccaacacatagaactggtttctcctacacct
cctgatgcagacgtctctacctttgatgttgtcggtcctgtctgtgaatctgcagatttc
ttgggaaaagagagagaacttccaaccccagctaaggggaccggcctggtggtgcatgat
gcaggtgcttactgcatgagcatggcatcaacatacaatctcaagatgcgccctcctgag
tactgggtcgaagaagatggatcggtgaccaaaatccggcatggggagacatttgaagac
cacattcgttttttcgagggtctgtga
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