Gossypium hirsutum (upland cotton): 107942476
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Entry
107942476 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107942476
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107942476
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107942476
03036 Chromosome and associated proteins [BR:
ghi03036
]
107942476
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107942476
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107942476
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107942476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
107942476
NCBI-ProteinID:
XP_016731629
UniProt:
A0A1U8N1C4
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All DBs
Position
D08:complement(68014790..68017850)
Genome browser
AA seq
501 aa
AA seq
DB search
MLRQFLSKIPRSFGNSDSPELTRPNSFMTAGPHTHRSNSFNSGCGRPCATKRTSSSIFPA
SVVAGIEPLLPFKNAPNSEKMNLFVSKVSLCCATFDFSDATKNSIEKDVKRQTLLELLDF
VASGSIRFSEPAILAMCRMCSTNLFRVFPPNYRSITSNNGENDDDDPIFCSAWPHLQIVY
DLLLKFITSSCLDAKVAKKYIDHAFILRLLDLFDSEDPRERECLKTILHRVYGKFMVHRP
LIRKDISNIFYRFVFEEERHNGITELLDIFGSIISGFALPLKEEHKIFLQRVLIPLHKPK
TLGVYFQQLSYCVIQFIDKDPKLSSTVIKGLLKYWPITNSQKEVMFLDELKDILEEIDMV
EFQKVMVPLSWQIGRCINSFHFQVAERALLFWNKEHIINIIAHNRHVIFPIILPALEKNA
RNHWNPSVLNLTLNVRKMFMDIDDGFFMSCLIHLKEEEAELSKSAEKRKKAWERLENAAN
HRPPTTRNTAALVTHSATSIS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgttaaggcaattcctcagtaaaattccacggagtttcgggaattcggattcgccggag
ttaactcggccgaactcattcatgacagccggtccacacactcaccgatccaacagtttc
aactcgggctgcggtcgtccctgcgccacgaaacgaacgtcctcctccattttcccggcg
agtgttgtggcaggaattgaacctttgttgccgttcaaaaacgcgccaaattcagagaag
atgaaccttttcgtgagtaaggttagcctttgttgtgcgactttcgatttcagtgacgcg
actaaaaattcgattgaaaaagatgtgaagagacagacactgcttgagctattagatttc
gtggcttctggatctattagatttagcgaacctgcgattttggccatgtgtaggatgtgt
tcgacgaatctgtttagggttttcccgccaaattatcggtctattacaagtaataatggt
gaaaacgacgatgatgatccaatattttgttcagcttggccacatttgcaaattgtgtat
gatttgctgctcaagttcatcacttcttcgtgtctcgatgctaaagtagctaaaaagtac
atagatcatgcctttattttgagattgctcgacttgttcgattctgaggatccgagagaa
agggagtgtttgaagactatattgcatagggtttatgggaagtttatggttcataggcca
cttattcgaaaggatataagcaatatattttatcgattcgttttcgaagaggagagacat
aatggaatcactgagttgttggacattttcgggagtataatcagcggattcgctctgcct
ttaaaggaggagcataagatcttcttgcagagggttttgattccgctgcacaagccaaaa
actttgggagtttactttcaacaattgtcttattgtgtcattcagttcattgataaggac
ccgaagctatctagtacagtgataaaggggttattgaagtactggccaataacgaacagc
cagaaggaggtgatgtttctcgacgagttgaaggatattttggaagaaatcgacatggtg
gaattccaaaaagttatggtcccattgtcttggcagattggtcgttgcattaacagtttc
cacttccaggtggctgaaagagcacttctcttttggaataaagaacatatcataaatata
atcgcacataaccggcatgtgatttttcccatcatacttccagccttggaaaagaatgcc
cggaaccattggaatccatcggtcctgaacttaactttaaatgtcaggaagatgttcatg
gatattgatgatggatttttcatgtcttgccttattcatttaaaggaagaagaagcagag
ctaagcaaatccgccgagaaacggaaaaaagcatgggagcggctagaaaacgcagctaat
cacaggccaccaacaactagaaatactgctgctctggtaactcattcggcaacctcaatt
tcgtga
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