Gossypium hirsutum (upland cotton): 107942694
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Entry
107942694 CDS
T04793
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00730
Thiamine metabolism
ghi00900
Terpenoid backbone biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
107942694
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
107942694
Enzymes [BR:
ghi01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
107942694
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_C_1
DUF1829
Motif
Other DBs
NCBI-GeneID:
107942694
NCBI-ProteinID:
XP_016731892
UniProt:
A0A1U8MYH2
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Position
D08:25725116..25730244
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AA seq
713 aa
AA seq
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MGTAPTQCPSGITANFHAKFDNRTEFSCSSFPFTLNLSKLNSHPTSKGLVNKIGSLPDID
DLFWEKVPTPILDVVENPTHLKSLSIRELKLLADEIRLELSSTMSKPQRSFKASLAAVEL
TVALHYVFHAPVDKILWDAGEQTYAHKILTGRRILMPTLRQKNGLSGYTSRTESEYDPFG
AGHGCNSISAGLGMAVARDIKGKRERVVTVINNTTTMAGQVYEAMSNAGYLDSNLVVILN
DSRHSLHPKIEEGPKTSINALSSTLSRLQSSKSFRKFREAAKDVTKRIGMGMHELAAKVD
EYARGMMGPLGSTLFEELGLYYIGPVDGHKLEDLICVLQEVASLDSMGPVLIHVITEENQ
CSEDKQKKVTVEKQQEGLSLNDIYSFSNDDHCRTYSDCLVEALVMEAEKEKDIVVVHAGI
EMNPSLKLFRERFSDRFFDVGMAEQHAVTFSAGLSCGGLKPFCIIPSAFLQRAYDQVVHD
VDRQRIPVRFVITSAGLVGSDGPLQCGAFDITFMSCLPNMIVMAASDEDELIDMVATATR
IDDRPVCFRYPRGALVRTDYPIHGGSALEIGTGKVLVEGKDVALLGYGAMVQNCLKAQAL
LSKLGINVTVADARFCKPLDIKLLRWLCSNHDILITVEEGSVGGFGSHVAQFIALDGQLD
GRLKWRPIVLPDNYIEHASPKEQLALAGLTGHHIAATTLSLLGRTREALLLMC
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgggtactgctccaacccagtgcccttctggaatcactgcaaatttccacgccaaattt
gataacagaactgagttttcatgctccagtttcccctttacccttaatctttcgaagctt
aacagccaccccacatcaaagggattagtaaataaaataggctctttgcctgatattgat
gatttgttctgggagaaagtccctacacctatacttgatgtggttgaaaaccccacccac
ttgaaaagcttgagtatcagggaactgaaattactagcagatgaaatccgtttggaattg
tcttctacaatgtcaaaacctcaaagatccttcaaggccagtttggcagcagttgaattg
acagtcgcattacactatgtttttcatgctccggtggacaagatactctgggatgccggg
gaacagacatatgcacataaaattcttacaggaaggcggatcctcatgcctacgttgaga
caaaagaatggtctttctggctatacttctcgaactgagagtgaatatgatccttttggg
gctgggcatgggtgtaacagtatatctgctggacttggtatggcagtagcgcgggatatt
aaaggcaagcgggaacgtgtagttacagtaattaacaataccacaactatggctggtcag
gtctatgaggccatgagcaatgctggttatttggattcaaatctggttgtgatcttaaat
gacagccgtcattctttgcatccaaagatagaagagggtcccaagacatccatcaatgct
ctatccagtacccttagcaggctccaatcaagtaaatcttttcgtaagtttagagaagct
gctaaggatgttaccaaaagaattggtatgggaatgcatgaactagcagccaaagttgat
gagtatgcacgtggtatgatgggtccacttggatcaactctctttgaagagcttgggctg
tattatataggtcctgttgatggacacaaattagaagatctgatatgtgttctacaagaa
gtggcatctctggattcaatgggtccagttttgattcatgtgataacagaggaaaatcaa
tgttcagaagataagcagaagaaagtgacagtggagaagcagcaagaaggtttaagtctg
aatgacatttactctttctcgaatgatgaccattgccgaacttatagtgactgcttggtg
gaagctttggttatggaggcagagaaagaaaaagatattgtagtagttcatgctggaata
gaaatgaatccatcactcaagttattccgagaaagattttcagacagattttttgatgtg
ggaatggcagagcaacatgcagttacattttctgctggtttatcatgtggagggttgaag
ccattttgtataattccttctgccttcctgcagagggcttacgatcaggttgtccatgat
gtagatcggcagaggattcctgtgcgatttgtcattacgagtgcaggattggtaggatct
gatggtccgttgcagtgtggagcatttgatataactttcatgtcatgtttgccaaacatg
attgtcatggcagcatcggatgaggatgagctgatagacatggttgccactgccaccagg
attgatgatcggccagtctgctttcggtacccaaggggtgccctagtcaggacagactat
cctatacatggtggaagtgctcttgagattggaacaggaaaagttcttgttgagggtaaa
gatgttgctttacttgggtatggggcaatggttcaaaactgtctcaaagctcaggccctt
ctttccaagctcggcatcaatgtaaccgttgctgatgcaagattctgcaagcctctcgat
atcaagcttctcaggtggctttgtagcaatcatgacattctgataaccgttgaggaaggt
tccgttggaggatttggttctcatgttgcgcagttcattgcgcttgacggacagctcgat
ggaagactcaagtggcgaccaattgtcttgccagacaactatatcgagcatgcatcaccg
aaagaacagcttgctcttgctgggctgactggacatcacattgctgcgaccactttgagt
ctcctcggacgtacccgtgaagcgttacttttaatgtgctag
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