Gossypium hirsutum (upland cotton): 107942848
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Entry
107942848 CDS
T04793
Name
(RefSeq) YTH domain-containing protein ECT2 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107942848
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107942848
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
107942848
NCBI-ProteinID:
XP_016732061
UniProt:
A0A1U8MZ29
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Position
D11:complement(59818523..59822242)
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AA seq
605 aa
AA seq
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MATSDRILANFTPLEVADSLENLSLDSQSKTTKAPEPVKKDFYSDNGSYMYPQTYGYMSY
APYSIPSPPLPAMGHDGQLHALQEYYYPSPYYQQPLQTSQANASQVDVSSFGATDQSSLS
VDTNKGNSNGITSGGSGSLKPTLKSSSLNPNAFYKGGGLPTGNLSQGYQDPRFSYDGIQS
PIPWLDMSVSPNGQSEQTANGGFSSYTNNLSSGRNQNLHPFPHVMNMHNARPSSGVGQAY
GYMNHMYPNNITYGHYGNTIRGGSGFGSYGYDARKKGLGWYNVGNNKSRFRGYGKENIDG
FNELNKGPRVKGYKNKDGSGNATLAVKDQNLPLTKSNNEDIVSLVPDTEQYNREDFPDSY
SDAMFFVIKSYSEDDVHKSIKYNVWASTSNGNKKLDAAFREAKEKPDGCPVFLLFSVNTS
GQFVGLAEIVGPVDFNKTVEYWQQDKWTGCFPVKWHIVKDVPNASLRHITLKNNENKPVT
NSRDTQEVNFEQGIQILKIFKDHSSKTCILDDFEFYESRQKIIQEKKAKHRLLQKQVSNG
EPNDDAVTDDKRNAAIAKEVSEKSTAASTAEVAKANGDVKHIEENGSVVATEDGPVKPVC
AASAC
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggccacttctgatcgtatccttgctaactttactcctctggaagttgcagattcactg
gagaacttgtctttggattctcaatccaagaccacaaaagctcctgagcctgtcaagaag
gatttttacagtgacaatggctcttacatgtacccgcaaacttatggttacatgtcatat
gcgccgtattctattcccagtccacctcttcctgctatgggacatgatggtcagctacat
gccttgcaagagtactactatccaagcccttattaccaacaacctctgcaaactagtcaa
gccaatgcttctcaagttgatgtttcgagtttcggtgcaactgatcaatcttccttatca
gttgatacaaataaaggaaattcaaatggtataacaagtggtggatcagggtcattaaaa
ccaaccttgaagagttcctctctaaatcctaatgctttttacaaaggaggaggcttgcca
actggtaatctatctcaaggttaccaggatccgaggtttagctatgacgggattcagtcg
ccaataccttggttagatatgtccgtgtctcctaatgggcaatctgaacaaactgcaaat
ggtgggttctcttcatatacaaacaacctctcatctggacggaatcagaaccttcatccc
ttccctcatgtcatgaatatgcacaacgcaagaccatcatcaggtgtaggccaagcatat
ggatacatgaatcacatgtaccctaacaatattacctatggtcattatgggaataccatt
agaggcggttctgggtttggatcatatggatatgatgcccggaagaaaggtctagggtgg
tataatgttggtaacaacaaatctaggttccgtggttatggaaaagagaatattgatggt
ttcaatgagctaaacaaaggacccagagtaaaagggtataagaataaggatggttctgga
aatgcaactctagctgtcaaagatcagaaccttccattgaccaagagcaataatgaggac
attgtctctcttgttccagatacagagcagtacaatagagaagattttcctgatagttat
tcagatgctatgtttttcgtcattaaatcctatagtgaggatgatgtccataaaagcatc
aaatacaacgtatgggccagtacatctaatggcaacaagaaacttgatgctgcattccgg
gaggccaaggagaagcctgatggctgtcctgtatttctactgttttcggtcaataccagt
ggacaatttgttggattagcagaaattgtgggtccagttgattttaataaaactgtagag
tactggcagcaagacaagtggactggttgcttccctgtgaagtggcacatcgtcaaggat
gttccaaatgcttcattgaggcacataacgcttaagaacaatgagaacaagcctgtcacc
aatagtagagacacccaagaggttaattttgagcaagggattcaaattctcaaaatcttt
aaggatcattcaagtaagacctgcattcttgatgattttgaattctacgagtctcgtcaa
aagataatccaagagaaaaaggctaaacatcggcttttacagaaacaggtttcgaatggg
gagcctaatgatgatgctgtaactgatgacaaacgaaatgcagccatagcaaaggaggtt
tcggaaaaatcaacggctgcatcaacggcggaggtagcaaaggcgaatggagatgttaaa
catatagaagagaatggatcagttgttgcaaccgaagatggccccgtgaaaccggtgtgt
gcagctagtgcttgctaa
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