Gossypium hirsutum (upland cotton): 107942878
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Entry
107942878 CDS
T04793
Name
(RefSeq) eukaryotic translation initiation factor isoform X1
KO
K03260
translation initiation factor 4G
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107942878
03012 Translation factors [BR:
ghi03012
]
107942878
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
107942878
mRNA cycle factors
Stress granule specific factors
107942878
Translation factors [BR:
ghi03012
]
Eukaryotic type
Initiation factors
eIF-4
107942878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
107942878
NCBI-ProteinID:
XP_016732096
UniProt:
A0A1U8MZ58
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Position
D05:875178..880645
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AA seq
789 aa
AA seq
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MQQGDQTVLSLRPGGGRGSRFLGGGGSSSSSSSSLSFGSLSSDLPLFLPHGGAPSSFSIK
AGDSRFDGRECVRYTRDQLLQLREAVEVSEEILKIKREIEVELFGEDQNWARGESNSSNQ
VPTRYTEPDNRDWRNRSAQFPSTGEERSWESLRDRESGNRYDSRQPEANQFNRQDQPNPQ
FSRAQISSNQGGGPTPALIKAEVPWSVRRGNLSEKERVLKTVKGILNKLTPEKYDLLKGQ
LIDSGITSADILKGVISLIFEKAVLEPTFCPMYALLCFDLNDKLPSFPSDEPGGKEVTFK
RVLLNTCQEAFEGADKLREEVRLMTSPEQEMERRDKERMVKLRTLGNIRLIGELLKQKMV
PEKIVHHIVQELLGQDSKACPAEENVEAICQFFNIIGKQLDESPKSRRINDVYFNRLKEL
TTNPQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRN
SRVVSVGPMSPGPGGFPINRPGTGGMMPGMPGTRRMPGMDNDNWEVPRSRPMPRGDGLGT
QSGGRGASPVVNKSTSMNQRLLPQGSGGLMSGRTSALLQGSSTPPAKPPNSILGAESVAQ
PSLSPKPAPVEKPLTQAARLNTDDLQRKTRALLEEYFSVRLLDEALQCVEELKSPAYHPE
VVKEAISIALEKSPPCVEPVSKLLEYLFIKEVLTARDIGTGCLLYGALLDDIGIDLPKAP
NNFGEIIGKLVLAGGLDFKVVKEILKKMEDDMYQKAVFDATMRIISSDPSGKALLDAQAI
NIDACTSLF
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaggtgatcagacagtgttgagcttaagacctggtggtggtcgagggagtaga
ttccttggtggtggtggttcttcttcatcgtcatcatcttctttatcttttggttcactt
tcttctgatcttccacttttccttcctcatggcggtgctccttcttccttttccatcaag
gcaggagactcacgatttgatgggcgtgaatgtgtgcggtacactagggaccagcttttg
cagcttagggaggctgtagaggtttctgaggagattcttaaaatcaaacgagaaattgaa
gtggaactctttggtgaagatcagaactgggctcgtggagaaagcaattcatcaaatcag
gttccgacccgttatactgagcctgacaatcgtgattggcgcaaccgctcagcacagttt
ccttctactggagaggagaggtcctgggaatcacttcgggatagagaatcgggaaaccga
tatgactccagacagcctgaagctaatcaatttaatcgacaagatcagcctaaccctcag
ttctcaagggcacaaatctcttctaaccaggggggaggaccaactccagccttgattaag
gctgaggtgccatggtcagtcagaaggggtaatctttctgagaaggagcgtgtcctaaaa
actgtaaaaggtatattgaacaagttgactcctgagaagtatgatcttttgaagggccaa
cttattgattcaggcatcacatcagctgacatcttgaagggtgttatttctttgattttt
gagaaggctgttttggaacccacattttgccctatgtatgctcttttatgctttgatctt
aatgataagctcccctcattcccatccgatgaacctggtggaaaagaagttacttttaag
cgagtcctgctgaatacctgccaggaggcatttgagggagctgataagctcagggaagaa
gtgaggttgatgacatctcccgagcaagagatggagcgcagggataaagaaaggatggtc
aagctccggactcttggtaacattcgtttaattggtgagcttctgaagcagaaaatggta
cctgagaagatagtccatcacattgtgcaggaacttttgggtcaagattctaaagcttgc
cctgccgaggagaatgttgaagccatttgtcagttcttcaatattattggtaagcagctt
gatgagagcccaaaatcacggcgcataaatgatgtgtacttcaacagactgaaggaattg
actacaaatcctcagcttgcaccgagactaagatttatggttcgtgatgttcttgatctg
cgtgcaaacaactgggttccaaggcgtgaggaggtgaaagccaaaacaattacagaaatc
cattcagaggctgaaaagaatcttgggctgcgtccaggcgctactgcaagtattagaaat
agtcgtgttgtttctgttggtccaatgagtcctggtcctggtggttttcctatcaatcgt
cctggtactgggggtatgatgcctggaatgccaggaactaggaggatgcctggaatggat
aatgataattgggaggttcctagaagccggccaatgccaaggggtgatggactgggtacc
cagtctggagggcgtggtgcctcaccagtagtcaataagtcaacttcaatgaatcaaagg
ctattacctcaaggtagtggtggcctaatgagtggtaggacaagtgccctgttgcagggt
agttcaacccctcctgctaagccacccaactcaattttaggtgctgagtctgttgcacaa
ccttctctttcccctaaacctgctccggtggagaaaccactaactcaggctgcaaggctg
aatacagatgatcttcagagaaaaacacgggcattgttagaggaatatttcagcgttagg
ctactagatgaagcattacagtgcgtggaggaactaaaatctccagcataccaccctgag
gttgttaaagaagcgatctccattgctttggagaaaagcccaccttgtgttgaacccgtt
tcaaagcttctggagtacttgtttattaaggaagttctcacagctagagacattggtact
ggatgcctactttatggtgccttgttggatgatatcggcattgacttgccgaaagcacca
aataatttcggagaaataattggaaaacttgttctggctgggggattagatttcaaggtg
gtgaaggaaatccttaagaagatggaagatgacatgtatcagaaagctgtattcgatgca
acaatgaggatcattagctcagatccttcggggaaagctctcttggatgctcaggcgatc
aacattgatgcatgtacgagtctattctaa
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