Gossypium hirsutum (upland cotton): 107943081
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Entry
107943081 CDS
T04793
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107943081
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ghi01007
]
107943081
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107943081
Enzymes [BR:
ghi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
107943081
Amino acid related enzymes [BR:
ghi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
107943081
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
107943081
Prokaryotic type
107943081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
DUF2740
Motif
Other DBs
NCBI-GeneID:
107943081
NCBI-ProteinID:
XP_016732299
UniProt:
A0A1U8N384
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Position
D12:complement(62682052..62690757)
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AA seq
591 aa
AA seq
DB search
MPTVSVGRDRLFTALGRSYTQEEFEDLCFSFGIELDDVTTEKAIISKEKHLEEEKPSADD
EIIYKIEVPANRYDLLCLEGLAQALLVFNGKEKIPKYTVANISKASMLKMHVKKETSLIR
PFLVCAVLRGITFDEASYNSFIDLQDKLHQNICRKRTLVAIGTHDLDTLQGPFTYEALPP
PEINFVPLKQVKNFRADELMEFYKSDLKLKKFLHIIENSSVYPVIYDRNRTVLSLPPIIN
GAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTTFSTYCKRKFEVEPVEVISFDGKSSV
YPDLSEYNMEVPLSYITGSIGVPLEVDEVTSLLKRMQLHAEKAGSGEAKISVSVPPTRSD
ILHPCDVMEDVAIAYGYNNIPKRTLSSLKPLPLNQLSDLIRYEIAMNGFTEVLTWILCSK
KENFEMLNRKDDKSTAVIIGNPRSSDFEVVRTSLMPGMLKTVGHNKDHPKPIKIYEVGDV
VLLDEKKDVGASNRRLLGALYCGANSGFELIHSLVDRIMEVMGTPFVPVGDKSGYFIELS
NEPEFLSGRQAKIIYKGGRIGIFGIVHPEVLNNFDIPDPCSFLELDIESFL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccgtcagcgttgggagggatcgtcttttcacagctcttggcagatcttacact
caagaagagtttgaagatctgtgtttcagtttcgggattgaacttgatgatgtgacaacg
gagaaagcaataatttcgaaagaaaaacatttggaagaggaaaaacctagtgctgatgat
gaaatcatttacaagattgaagtgcctgctaacaggtacgatttactttgtttggaaggt
cttgcacaagcccttctagttttcaatggaaaggagaagatacctaaatacacagttgcc
aacattagtaaggcatcgatgcttaaaatgcacgtgaaaaaagagacatctctaatccgg
ccttttcttgtctgtgcggttttgaggggcataacttttgatgaagcaagctataacagc
ttcattgatcttcaggataagctgcaccaaaacatttgcaggaaacggacactagttgct
attgggacacatgacttggatacattacaagggccttttacgtatgaggcgttgccacct
ccagagataaattttgttccactgaaacaggtgaagaacttcagagctgatgagctgatg
gaattttacaagtcagatttgaagttgaagaagttcttgcacattattgagaattcaagt
gtgtaccccgtcatttatgaccgcaatagaactgttttgtctttaccaccaattatcaat
ggtgcacactcagcaatcactttgaagacaaaaaatgtcttcattgaatgcactgcaact
gatttaacaaaagccaaaattgttttaaatacaatggtaacaacattttcaacatactgc
aaaaggaaatttgaggtggaacctgttgaagtgatatcatttgatggaaagtcaagtgtt
tatccagatttatcagaatataatatggaagttccactatcatatattaccggttccatt
ggagttcctctggaggtagatgaggtcacaagcctattaaaacgaatgcaattgcatgct
gaaaaagctggatcgggtgaagctaagatcagtgtgtctgtacctccaaccagaagtgac
attcttcatccatgtgatgtcatggaggatgttgcaattgcttatggctataataatatt
ccaaagagaacgctttcttctttgaagccccttcccttgaaccagctcagtgatcttatt
agatatgagattgcgatgaatggttttactgaggtgttgacatggattttatgttctaag
aaagagaattttgagatgttaaaccggaaggatgataaatccactgcagtgatcattgga
aacccgcgctcttctgattttgaggtggtccgcactagtctcatgcctggcatgctgaag
actgttggacataacaaagaccatccgaagcccatcaagatttatgaagtgggtgatgta
gtacttttggatgagaagaaagatgttggtgcatcaaaccgccgcctacttggtgcatta
tattgtggtgctaactccggttttgagttgattcatagcctggtggacagaatcatggaa
gttatggggactccttttgttccagttggtgataaatcaggatattttatagagctttct
aatgagcctgaatttctgtcaggtaggcaagcgaaaatcatttacaaaggagggcgcatt
ggcatctttggtatcgtgcaccctgaggtgttgaataattttgacattccggacccatgc
tccttcttggaacttgatatagagagcttcttatag
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