Gossypium hirsutum (upland cotton): 107943236
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Entry
107943236 CDS
T04793
Name
(RefSeq) aconitate hydratase, cytoplasmic isoform X1
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00020
Citrate cycle (TCA cycle)
ghi00630
Glyoxylate and dicarboxylate metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi01200
Carbon metabolism
ghi01210
2-Oxocarboxylic acid metabolism
ghi01230
Biosynthesis of amino acids
Module
ghi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ghi_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
ghi_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
107943236
00630 Glyoxylate and dicarboxylate metabolism
107943236
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
107943236
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
HypD
Motif
Other DBs
NCBI-GeneID:
107943236
NCBI-ProteinID:
XP_040948444
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All DBs
Position
D05:complement(64082348..64089107)
Genome browser
AA seq
1022 aa
AA seq
DB search
MYCRARFASRLASTTAAAAASFSPSACSRVSSPIASPSSASSVSFWNQRYRSLSFSSSLR
SLRCSAPRLHWRSPESLRDLARTSAPVVERFHRRIATTASEHPFKGVMTSLPKPGGGEFG
KFYSLPALNDPRIDRLPYSIRILLESAIRNCDNFQVTKDDVEKIIDWENTSPKQVEIPFK
PARVLLQDFTGVPAVVDLASMRDAMKNLGNDPKKINPLVPVDLVVDHSVQVDVARSENAV
QENMELEFKRNKERFAFLKWGSSAFHNMLVVPPGSGIVHQVNLEYLGRLVFNSDGMLYPD
SVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLPGVVGFKLSGKLCDGVTATD
LVLTVTQMLRKHGVVGKFVEFYGEGMGELSLADRATIANMSPEYGATMGFFPVDHVTLQY
LKLTGRSDETVSMIEAYLRANKMFVDYNEPQQERAYSSFLQLDLAEVEPCISGPKRYAHY
LFSFNASLLYFTYRQFSLMLSTRPHDRVPLKEMKADWHACLDNNVGFKGFAVPKEEQDKV
AKFTFHGLPAELRHGSVVIAAITSCTNTSNPSVMLGAGLVAKKAYELGLEVKPWIKTSLA
PGSGVVTKYLLQSGLQKYLNQQGFNIVGYGCTTCIGNSGELDESVASAISENDIIAAAVL
SGNRNFEGRVHPLTRANYLASPPLVVAYALAGTVDIDFEKEPIGTGKSGKSIYFKDIWPS
NDEIAQVVQSSVLPDMFKSTYEAITKGNLMWNQLSAPASTLYSWDPNSTYIHEPPYFKHM
TVEPPGLHGVKDAYCLLNFGDSITTDHISPAGSIQKDSPAAKFLLERGVDKKDFNSYGSR
RGNDEVMARGTFANIRIVNKLLKGEAGPKTIHVPTGEKLYVYDAAMRYKAAGQDTIVLAG
AEYGSGSSRDWAAKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKPGEDADFLGLTG
HERYSIDLPNKISEIRPSQDVTVTTDTGKSFTCTVRFDTEVELAYFDHGGILPFVIRNLN
KE
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtagggcacgattcgcctcgaggctagcttcgacgacggcggcggcggcggcg
tcgttttcgccttctgcgtgtagtagagtttcgtcgccgattgcttctccgtcttctgct
tcttctgtttcgttctggaaccagaggtaccggtctttgagtttctcgtcttcgctcagg
tcgctgaggtgctcggcgccgcggctccattggaggtcgccggagagccttcgtgatctg
gcgaggacctctgctccggttgtggagaggttccaccggaggatcgctactactgcttct
gagcatcctttcaagggagtgatgacaagccttcccaagcctgggggtggagaattcgga
aaattctatagtttgccggctttgaatgatccacgaattgaccgtcttccatactcgata
aggatccttttggaatctgctatccgtaactgtgacaactttcaagtcacaaaggatgat
gttgagaagatcattgattgggagaatacatcaccgaagcaagttgaaatccccttcaag
cctgctcgtgttctcttacaggattttactggagtgccagctgtagttgaccttgcaagc
atgcgggatgctatgaagaatcttggcaatgacccaaagaagattaatccattggttcca
gtagaccttgtcgttgatcattcggttcaagttgatgttgcaagatctgaaaatgcagta
caagaaaacatggaacttgaatttaagaggaataaagagagatttgctttccttaaatgg
ggctcatctgcttttcataatatgcttgttgttcctccaggttctggaattgttcaccag
gtgaacctggaatacctaggacgtcttgtttttaactctgatggaatgctctaccctgat
agcgttgttggtactgattcacatacaactatgatagatgggttaggagttgcaggttgg
ggagttggaggaattgaagcagaggcagcaatgcttggccagccaatgagcatggtttta
cctggtgttgttggattcaagctatctggcaaattgtgtgatggtgtcacggccaccgac
ttggttttgactgtgacacagatgttgaggaagcatggtgttgttggcaaatttgttgag
ttttacggtgagggaatgggtgaattatcattggctgatcgagccacgatagctaatatg
tcgcctgaatatggagcaaccatgggctttttccctgtagatcatgtaacactgcagtat
cttaagctaactggtagaagtgatgagacagtatcaatgatagaagcttatttgcgtgca
aacaagatgtttgtcgactacaatgagcctcaacaagaaagagcatacagttctttttta
cagttggacctggctgaagttgaaccctgtatctcagggccgaagcggtatgcacattac
ctcttttcttttaatgcctctttattatattttacttatcgacagttttctttgatgctt
tctactaggcctcatgaccgagttcctttgaaagaaatgaaggctgattggcatgcatgt
cttgataacaatgttggattcaagggttttgctgtgccaaaggaagagcaggataaagtt
gctaagttcacattccatggcctgcctgccgaacttagacatggaagtgttgtaattgcg
gctatcaccagctgtacaaacacatcaaaccctagtgtcatgcttggggctgggcttgtt
gctaagaaggcttatgaactaggtttggaggtcaagccatggattaaaacaagtcttgct
cctggatctggagttgttacaaagtatttacttcagagtgggctgcaaaaatacttaaat
caacaaggttttaacattgttggttatggctgcacaacttgtatcggaaattctggagaa
cttgatgaatcagttgcttcagcaatttcggaaaatgatatcattgctgcagccgttctt
tctgggaatagaaactttgaaggtcgtgttcatcccctaaccagagctaactaccttgct
tcacctccattagtagttgcctatgcccttgctggcacggttgatattgatttcgagaaa
gagcctatagggacaggaaaatctggtaaaagtatatatttcaaggatatatggcctagc
aatgatgagatcgcacaggttgttcaatctagtgtgttacctgatatgttcaagagcacc
tatgaagccatcacaaagggcaatctgatgtggaatcaactttccgcccctgcttccacg
ctttattcttgggatccaaactcaacatacattcacgagcctccatatttcaaacacatg
actgtagaaccaccaggcctgcatggagtgaaagatgcctattgcttgctcaattttggt
gacagtattaccaccgatcacatctctcctgcaggtagcatccaaaaggatagccctgct
gctaagtttcttcttgagcgtggggtggacaaaaaggacttcaattcctatggtagtcgt
cgaggcaatgatgaagtgatggcaaggggcacctttgccaatatccgcattgtcaacaag
ctcctgaagggagaagctggtccgaagactattcatgttccgacaggagaaaagctttat
gtatatgatgcagcaatgaggtacaaggctgctgggcaagacacgatagtcttagctgga
gcagagtatggaagtggcagctcaagagattgggctgccaagggcccaatgttactgggc
gtgaaagcagttatcgccaagagctttgagagaatccatcgaagtaatctggttggtatg
ggaatcattcctctttgtttcaagcctggtgaggacgctgattttttaggattaactggc
catgaacgttattcaattgaccttccaaataaaatcagtgagataaggcccagccaagat
gttacagtcacaactgacactggcaagtcgttcacgtgtactgttcgcttcgatactgag
gtggaattggcatactttgatcacggtggcattcttccatttgttatccgtaacctaaac
aaagagtag
DBGET
integrated database retrieval system
