Gossypium hirsutum (upland cotton): 107943304
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Entry
107943304 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like isoform X2
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107943304
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107943304
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107943304
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_2
zf-Nse
Motif
Other DBs
NCBI-GeneID:
107943304
NCBI-ProteinID:
XP_016732543
UniProt:
A0A1U8N3Z2
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Position
A01:complement(523226..527447)
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AA seq
213 aa
AA seq
DB search
METDDTGRKMEEELGGNKRLSETPPDDDCCPICFGPFTVPCRSNCGHWYCGSCILQFWNY
SSASKPCGCPMCTCMIVNLMPEASLEQQPQNQEVAEVLKSVRRYNLLFLGGARGFIQKVR
ELPFFIKRIFQGLMDPDTNDTYIAEIRLFAMLLSIIYRATPLDFIPTGGIGIGRVFDCSA
IILILILRLVGIYRRRRLMQRVRRLAAMELLQE
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatgatacaggtagaaaaatggaggaggaattaggaggcaataagagattg
agtgaaacccctcccgatgatgattgttgcccaatttgctttggtcccttcactgttcct
tgtcgatctaattgcggccattggtattgcggaagttgtattttgcaattctggaactat
tcctcggcgtcaaagccatgcgggtgtcccatgtgtacctgcatgattgttaatttgatg
ccagaggcatcgttggaacaacaaccacagaaccaagaagttgccgaggtgcttaaaagt
gtacggaggtataacctcctctttcttggaggtgcacgtggattcattcagaaagtgcgt
gagttaccattcttcatcaagagaatcttccagggattgatggatcctgatacaaatgat
acatatattgccgagattcgcctttttgcaatgttgctaagtatcatctacagagccaca
ccattagattttattccaacaggggggataggaatcggaagggtgtttgattgttcagcg
attattctcatactcatcctacgtctggttggtatctatcgcagacgacgacttatgcag
cgtgtgaggcgcttagccgccatggaacttttacaagaatga
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