Gossypium hirsutum (upland cotton): 107943378
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Entry
107943378 CDS
T04793
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1 isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107943378
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
107943378
Glycosyltransferases [BR:
ghi01003
]
Polysaccharide
Structural polysaccharide
107943378
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
107943378
NCBI-ProteinID:
XP_016732612
UniProt:
A0A1U8N0H3
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Position
A11:3409547..3413523
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AA seq
511 aa
AA seq
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MCSVEGIGKKGGMRIGVIKGGGGGASGGERVDKLKKSSRMKVWIIRATTSVLLWTCIVQL
TTLGETWGPRVLKGCPSCFSHQDSSVSAIEDKLPSVPARVIPPKRVYKNNGYLMVSCNGG
LNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSEFQDIFDVNHFITSLRDEVRILK
ELPPRLKRRVEMGFVYSMPPISWSDISYYHNQILPLIRKYKVVHLNRTDARLANNGQSLD
VQKLRCRVNFNALRFTPQIEELGKRVIKLLRQNGPFIVLHLRYEMDMLAFSGCTQGCNND
KVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALILRALDIDKNYHIYIAAGEI
YGGDRRMASLAAAYPKLVRKETLLGPSDLGFFQNHSSQMAALDYLVSLESDIFIPTYDGN
MAKVVQGHRRYLGFKQTILLDRRLLVDLIDQYNNGSLSWIQFSDTVKETHERRRGQPSKR
LVIPDRPKEEDYFYANPEECLQQRDGQLSST
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagtgttgaagggatagggaaaaagggaggtatgagaatcggggtaataaaaggg
ggcggaggcggagcaagcggaggagagagagtggataagttgaaaaagagttcgagaatg
aaggtttggatcatacgcgccaccacatcggtgttgctgtggacttgcatcgtacagtta
acgaccttgggggagacatggggacctcgcgtccttaagggttgcccttcctgtttctct
caccaggattcttcggtttccgccattgaagacaaacttccctcggttcccgcccgtgta
attcctcccaaaagagtgtataagaacaatggttatttgatggtttcatgtaatggaggt
ctcaatcaaatgcgagcggcaatttgtgacatggttactattgcaagatatttgaatgtc
acgcttatagtcccggagctggataaaacatccttctgggccgatcccagtgaatttcaa
gatatatttgatgtgaatcatttcattacatcactgagagatgaggttcgaatattgaag
gagttgcctcctaggcttaagaggagagtggaaatggggtttgtgtattcaatgccacca
attagctggtcagatatatcttactatcataatcagattcttcctctgatacggaagtat
aaagttgtacatttgaatagaactgatgctcgacttgccaacaacgggcagtctttagat
gttcagaagctgcgatgtcgtgtaaattttaatgctttaagattcactcctcagatagaa
gagttgggtaaacgagttattaagcttctgaggcaaaatggtcctttcatagtacttcac
cttagatatgaaatggacatgttagcattttctggctgtacgcaaggttgcaacaatgac
aaagtggaggagttgacaagaatgagatacgcttatccatggtggaaagaaaaaataata
aattctgacttgaaaaggaaagatggtttgtgccccttgacgcctgaggaaactgccctt
attttgagggcactggacattgataaaaattaccacatctatatcgcagctggtgaaata
tatggtggagataggagaatggccagtcttgctgctgcttatccaaaattggttagaaag
gagactctattggggccatctgaccttgggtttttccaaaatcattcatcccagatggca
gcattagattatcttgtttcattggagagtgatatttttattcccacttatgatgggaac
atggctaaagttgttcaaggccatcgcaggtatttggggttcaagcagacgattttgctg
gacagaaggctattagtcgatttaatagaccagtacaataatggatctctaagttggatc
cagttctcagacactgtgaaggaaactcacgaaaggcgcagggggcaaccgagtaagagg
ttggtgattcctgacaggcctaaagaagaggattacttctatgccaacccagaagaatgc
ttgcaacaacgggatggtcaactaagtagcacgtga
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