Gossypium hirsutum (upland cotton): 107943478
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Entry
107943478 CDS
T04793
Name
(RefSeq) 25.3 kDa vesicle transport protein-like isoform X2
KO
K08517
vesicle transport protein SEC22
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
ghi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107943478
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
107943478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107943478
Membrane trafficking [BR:
ghi04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
107943478
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
bCoV_NS6
DUF1836
Motif
Other DBs
NCBI-GeneID:
107943478
NCBI-ProteinID:
XP_016732716
UniProt:
A0A1U8N0V2
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Position
D12:61575838..61577839
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AA seq
276 aa
AA seq
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MILEYPKKYILKTTFLLMKLAIDPPHRVSFFSFCTQPKWYNFVFIFTSNIISALPSEQAF
PPFIPYITHHPRLERPKKKLFHNQKMVKLTIVGRVKDGLPLAQEARYMNNKTTTSHNLSS
NYKQQAEFLLNEISKGALPLPSMTIRVDHHSFNYLVVNGICFITLCDSSYPRKLAFNYLQ
DLQKEFDKFDNGLIHKITKPYSFVKFDSIISSIRKQYIDTRTQANLSKLNANRHRELDIV
TGNMSDIVERRRNSGNCIDLDTHCNHYCYCLDSFMG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcgaataccccaaaaaatatatattaaaaacaacatttctcctcatgaaactt
gctattgacccaccgcacagggtttcattttttagcttttgcacgcagccgaagtggtat
aacttcgtcttcatcttcacgtctaatataatatcagctttgccttcagagcaagcattt
cctccctttatcccctatataacccatcacccacgccttgagagaccaaaaaagaaattg
tttcataatcaaaaaatggtgaagctaaccattgttggaagagtgaaagatgggttacca
ctggcacaagaagcaaggtacatgaacaacaagacgacgacgtctcacaacttatcatct
aactacaagcaacaagctgagttccttctcaatgaaatctccaaaggagctttaccactt
ccctcaatgaccatccgcgttgatcaccattctttcaactatttggtggtgaatggaatc
tgcttcatcacattatgcgattcttcatatccaagaaaactagctttcaattatcttcag
gatttgcaaaaggagtttgacaagtttgataatggcctcattcacaaaattactaaacca
tacagctttgttaaattcgatagtattatttctagtattaggaagcaatacattgataca
agaacacaggccaatttatcgaagctgaatgctaatcgtcatcgagaactcgatatagtt
accggaaacatgtccgatatcgtagaaagaagacgaaattcgggcaattgcattgatttg
gacacccattgcaatcattactgttattgcttggattcttttatgggttag
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