Gossypium hirsutum (upland cotton): 107943488
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Entry
107943488 CDS
T04793
Name
(RefSeq) vesicle transport v-SNARE 13
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107943488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107943488
Membrane trafficking [BR:
ghi04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
107943488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
SKA1
Cytochrome_B
ETRAMP
Fusion_gly
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
107943488
NCBI-ProteinID:
XP_040953881
UniProt:
A0A1U8N0W2
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All DBs
Position
D07:complement(55400512..55403400)
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AA seq
221 aa
AA seq
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MSEVFEGYERQYCELSANLSKKCTAAGALAGEQKKQKLSDVRAGVEDAEALIRKMDLEAR
SLQPNVKAVLLAKLREYKSDLNNLKSEVKRIASGNLNAAARDELLESGMADTRTASADQR
SRLMMTTERLNQSSDRIKDSRRTMLETEELGVSILQDLHSQRLALLHANNTLHGVDDNIG
KSKKILTAISRRVSRNKWIIGTIIAVLIIAIALVLYFKLAK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagttttcgaaggatatgaacggcagtattgcgagctatcggcgaatctttcc
aagaagtgtacggctgctggtgctcttgctggagagcagaagaaacaaaaactttctgat
gtaagagctggagtggaagatgccgaagctctgattcgaaagatggacctcgaggcaaga
agtttgcagccaaatgttaaggctgtacttcttgctaagttaagggaatataaatcagat
ctaaacaatctgaaaagtgaagttaaaagaatcgcgtctggtaatttgaatgcggctgct
cgagatgagctgttagagtctggcatggctgatactcgcacggcatcagctgatcaaaga
tcaagattaatgatgactacagagcggttgaatcagagcagtgacagaattaaggacagc
aggagaaccatgttagaaacagaagagcttggggtttcaattcttcaggatttgcattca
cagcgactggctctcttacatgccaataacacgctccatggagtagatgacaacatcggc
aagagcaagaaaattttgacagctatttctaggagggtgagcaggaacaagtggatcatt
ggcaccattatcgccgtccttatcattgcgattgctcttgttttgtacttcaaacttgct
aaatag
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