Gossypium hirsutum (upland cotton): 107943587
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Entry
107943587 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107943587
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107943587
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107943587
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107943587
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107943587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
107943587
NCBI-ProteinID:
XP_016732844
UniProt:
A0A1U8N4T0
LinkDB
All DBs
Position
A06:complement(4054913..4061950)
Genome browser
AA seq
1070 aa
AA seq
DB search
MLLIGDLGFSSLVLVVSIIIPLFGFFIRRKWRLSIARQAEIKRLMILASEEAARAELEAS
IGYGSVPVSLNYHQCAVCYCPTTTRCARCKAVRYCSTQCQVIHWRQGHKKECYPAAVAIH
QNHDEGSDCDSGQKVMGQHQIGDGFESKEKQHAEPTESSSKESALHNSTTEPALSSSTSC
SAVLLEKDDDIKVEFQADGEGRSIASESSSTSFSGFSSSVTGSESSDDVSVCESVGSNEP
CRLEISSSADDSKLDTLWTASGVNNVDQTNLSSPKFASLVDSVDKFSKLNASNQMKPDQG
GEIQCRASGSSSGISDMYEGSTSEVRTLSSGFWGRTLEPVVSTNDVNDEAFQSNPKESGE
SASLDPGSSLHFSFSLSQNASSLPPQGLKVKAAKLDDAPRSASGYTQLSYGVTLPENVDL
DAPNVSSSSSSNSECANHVECGSTNVSPIPKPREAINRDVPLVSSLSSSCSEKSDSSSVI
NGPSTSHVLKSSDAYSSSARVHVVPNAKSGNFGGVHANAATLPKVSSSSDSTHGLKTSMR
KIADQFRGSKLPKHYPLGVGNEDSGNYNDKVLFSYESFVKLYSGSKANLQPCGLVNCGNS
CYANAILQCLTFTPPLTAYFLQGLHSKACAKKEWCFTCDLENLILKAKEGKSPLSPKGIL
SQLQNICGQLVQGKEEDAHEFLRYVIDVMQFDCLKKAGVRSSGCSEEETTLIGLTFGGFL
RSKIMCVKCQGKSERYERMMDLTVEIEGDIETLEEALHRFTRTEILDGENKYQCGRCNSY
EKAKKKLTISEAPNVLTIALKRFQSGKFGKLNKAIQFPEILNLAPYMSGTSDNSPIYRLY
GVVVHLDIMNAAFSGHYVCYVKNAQNKWFKIDDSKVTSSELGNVLTKGAYMLFYARCSPR
APRSIRSRSKSILSKMNSKNYPKSSSTHPDSSGSIESFCSKYNRLQKILEVDSSSDTSSL
FSSNSDYTSSCTDSTRDDSLDSVFGDSDASSSSSSSPLYSKHSPLADLDRYGSGSPEMDP
LFHSDTSKQCRDVGSYSNSSSFRETDSKLLGRVNSLKEVYFRKSLKKRTN
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttattggggatctagggttttcgagcctggtccttgtggtttccatcattatt
cctttgttcggctttttcattaggcggaaatggaggttatcaatagccaggcaagcggag
atcaagaggcttatgattttagcctcggaggaggctgccagggctgagcttgaggcatca
attggatacggtagtgttccagtttcgcttaactatcatcaatgtgctgtttgctattgc
cctactactacacggtgtgctcgctgcaaagctgtccggtattgttctactcagtgtcaa
gttattcactggcgacaaggtcacaagaaagaatgctatccggctgcagttgccatacac
caaaatcatgacgagggaagtgattgtgattctggtcagaaggtgatggggcaacaccaa
attggagacggatttgaatctaaagaaaagcagcatgcagagccaactgaatcatcctcc
aaagaatctgcgttacataattccaccactgaacctgcactgtctagttctactagctgt
tctgcagttttacttgagaaggatgatgatataaaggttgagttccaggctgatggggaa
ggaaggagcattgcttcagaatcttccagtacttcattctctgggttttcttcttctgta
actggtagtgaatcgtctgatgatgtttctgtgtgtgagagcgttggttcaaatgagcct
tgtagacttgagatatcttcatctgctgatgactctaaacttgacacattgtggactgct
tctggtgtcaacaacgtggatcaaaccaatttgtcatccccaaaatttgccagcttggtt
gattctgtagataaattttctaaattgaatgcatcaaatcagatgaagcctgatcaaggt
ggagagatccaatgcagagcaagtggcagttcttcaggtattagtgatatgtatgagggc
tcaacttctgaggttcgtactttatcttctggtttctggggcagaactctggaaccagtt
gtatctacgaatgatgttaatgatgaggcttttcagtctaatcctaaagaaagtggtgaa
agtgcctcacttgatcctggatcttccttacatttttcattcagtttgtctcaaaatgct
tcttccttgcctccacaaggcttgaaggttaaagctgccaaattggatgatgctcctcgg
agtgcttcggggtacacccagctttcttatggagtaactttgccagaaaatgttgatttg
gatgctccaaatgtcagcagctcctcatcctcaaattctgaatgtgctaaccatgtggag
tgcgggtctaccaatgtttcacctatcccaaaacccagagaagctatcaatagagatgtt
ccgttagtcagtagcttgtcatcgtcatgttctgaaaagtcagattctagttctgttatt
aatggacctagcacttctcatgtattaaagtcttctgatgcttattcatctagtgccaga
gtgcatgtggttcctaatgctaaatctggaaattttggtggtgttcatgccaatgctgct
acgttacctaaggtttcaagttcttctgatagcacacatggattgaaaacctccatgcgg
aaaattgctgatcaattcagaggatctaagttgcccaaacactatcctttaggagttggt
aatgaggattctggaaattataatgacaaggtacttttttcttacgagtcttttgtcaag
ctttacagtgggagcaaggcgaacctgcaaccatgtggccttgtaaactgtgggaacagc
tgttatgccaatgctattctccaatgcttgacattcactcctcccttgactgcttacttt
cttcagggactccattcaaaagcatgtgcaaagaaagaatggtgtttcacctgtgattta
gaaaatttaattttgaaggccaaggagggaaaatctccattgtcccctaaagggatactg
tctcaactacaaaatatttgtggccaacttgttcaagggaaagaggaggatgcacatgaa
tttttaaggtatgttattgatgtgatgcaatttgattgtcttaaaaaagctggggtgcgt
tcatcaggttgttcagaagaagaaacgactttaataggcctaacatttggaggttttctc
cggtcaaagataatgtgtgtgaaatgtcaaggcaagtctgaacgttatgaaagaatgatg
gatcttacggttgagattgaaggagacatagagaccctggaagaggctcttcatcgcttt
acgaggactgagattttagatggagaaaataagtaccaatgtggcagatgcaactcttac
gagaaggccaaaaagaagttgacaatatcagaggctccaaatgtcctcacaattgctttg
aagcgatttcagtctggtaaatttgggaagcttaacaaagcgattcaattccctgagatc
ttgaacttggcgccgtatatgagtgggacaagcgacaattcacccatttacaggctctat
ggtgtggtggttcacttggatattatgaatgctgcattttcaggtcactatgtctgctac
gttaaaaatgcccaaaacaaatggttcaagattgatgatagcaaggtaacatcctctgaa
cttggtaatgttctaacaaaaggcgcatacatgcttttttacgcgaggtgctcacctaga
gccccaagatcgataaggagcagaagtaagtccattctatcaaaaatgaattcaaagaat
tatccaaagtcaagttcaactcatcctgatagttcagggagtatcgaatccttttgttcg
aaatacaatcggttacaaaagattttagaagtggattcatcaagtgatacttcttctctt
tttagcagcaattctgattatacttcttcctgtactgatagcacacgagatgactcactg
gattctgtatttggcgattcagatgcttcatcttcctcttcctcttctcctctttactca
aagcattcacccttagctgatttagaccgatacggttcaggttcgcctgaaatggatcct
cttttccactccgacacgagtaaacaatgtagagacgtaggtagttatagtaatagtagt
agctttagggaaactgactcaaagttattaggacgagttaactcattaaaagaggtatac
tttagaaaatcattgaagaaaagaacaaattaa
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integrated database retrieval system
