Gossypium hirsutum (upland cotton): 107943799
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Entry
107943799 CDS
T04793
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNL1-like isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107943799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107943799
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
107943799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
107943799
NCBI-ProteinID:
XP_016733094
UniProt:
A0A1U8N218
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All DBs
Position
A05:complement(102371166..102377141)
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AA seq
1430 aa
AA seq
DB search
MGDVTTQSRNNGFIEEIIKPSRGAFTSMINSEIVAVLAVMRRNVRWGIYYVADDDHLEHS
LIHSLKELRRKIFSWQHQWQNVDPVVYLQPFLDVIQSDETSAPITGIALSSIYKILTIDV
LDLDIVNVRVAMHMIIDAVTSCRFEVTDPASEEVVLMKILQVLLACMKSKAATRLSNKHV
CMIANTCFRIVHQASSKGELLQRIARHTIHELVRCIFSHLPKICSTEHEMVNESSLVASG
VVGTQNENHMNGSTQLKSGNVGIDESENKEDAQNGEILMMAPFGIPCMVEIFQFLCSLLK
VTENIGIGPKSNMIAHDEDVPLFALGLINSAIELGVSLFSKHPKLLAVIQDELFYNLMQF
GLSMSPLILSTVCSIVLNLYYHLRTELKVQLEAFISCVLLKLVQSKHGFSYQQQEVAMEA
LVDLCSQHMFVAEMYANFDCDITCSNVFEDIAYMLSKSAFPVNEPLSAMHILALNGLVSI
IKGMAKRTCNELSISEEDSTNYEGYEAFWTLKCLNYNDPSSWIPFVRKMKRIKRKLTIGA
DHFNRDPKKGLEFLQGIHLLPDKLDPESVASFFRYTNGLDKNLIGDFLGNHGEFCVHVLH
EFSRTFDFHDMTLDSALRVFLGTFRLPGESQKIQRVIEAFAERYYEQSSHLFCDRDATLL
LSYSLIMLNTDQHNAQVKKKMTEEDFIRNNRLINGGKDLPREYLSELYHSICENEIQMIP
DQGAGFPTMTLSRWINVIYRSKESAPFILCDSRVPLYHDMFAILSGPTIAAISVVFDQAE
QENVLQTCIDGFLAIAKISTHYRFGDILDDLVVSLCKFTTLLTPLSFEDAIISFGDGPRA
RMATTTVFTIANKYGDCIHSSWRSIFDCVLSLHKLRLLPPSLANDAADETDSSSDYVWSK
PDTSSLLISRTTPAAIPRRSFSLFGRFSQLLSFEVEEPLLHPTHEQLAAQQFLREIVLKC
HIDNIFMDSKFLQAESLLQLVEAIILATVQFSKGSDIIEDEDSAVFCLELLISITLNNRD
RILIIWKNVYKFLSDIVQQKAMPCALVEKAVFGLLKICQRLLPYKENLTDELLKSMQLIL
RLDARVADAYCEPITQEVMRLVKANASHIRSHSGWHTIISLLYITAQHPEASEFGFEALA
FIMFDGAHLLPSNYVLCVDAAREFAESRVGEIDRSISSLEMMASSVVCLVRWSYEAKNTA
NEEAAMKVSKDLGEMWLRLLQALKVVCLDQREEVRNHAILMLQRSFAGVGGISIPNTIWF
QCFNLVVFTLMDDLLEIALGSSPKEYKKMEGTLVLATKLMLKAFLQSLEELSQQASFCKL
WLEVLDRMERYMKFKFRGKHSEKIHESIPELLKNTLLVMKTTGILIPSDDVGRDSFWQLT
WLNVKKILPSLQSEVFLEPELEQMQAKHKKISGIPATNETMLIPSNETTT
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgtgactacacaatctagaaataatggatttattgaagaaattatcaagccc
tctagaggtgcttttacatctatgattaattccgaaattgtggctgttttggctgtcatg
aggagaaatgttcgatggggaatctactatgttgcagatgatgatcatctagagcattct
ctcatccactccttgaaagaattgcggagaaaaatattttcatggcagcatcagtggcaa
aatgttgatccagttgtgtacctccaaccatttttggatgtaattcaatccgatgaaacc
agtgcaccaataactggcattgccttgtcttccatttacaaaatcttaactattgatgtt
ctagatttggatattgtaaatgtgagagttgctatgcatatgattatcgatgccgtgaca
agttgccgattcgaggtaactgatccagcatctgaagaagtggtgctgatgaagatactt
caagttcttctagcttgtatgaaaagtaaggctgcaactaggttaagtaataagcatgta
tgcatgatagcaaacacatgttttcgtattgttcatcaagcaagctccaaaggtgaatta
ttgcagcggatagctcggcatacaattcatgagttagttagatgtattttctctcatctt
cctaagatttgtagtacagaacatgaaatggtcaacgaaagctcattagttgcttcagga
gtggtgggtacgcagaatgagaatcacatgaatggaagtacacaattaaaaagtggaaat
gtgggtattgatgaaagtgagaataaggaggatgctcaaaatggtgagatattgatgatg
gcgccttttgggatcccatgcatggtggagatatttcaatttttgtgttctttgttaaag
gtcactgaaaatattggtattggccctaaatcgaatatgatagcgcatgatgaagatgtt
ccactctttgcattaggcttaattaattctgctatagaattgggtgtgtcattattcagc
aaacatcccaagttattggctgtaattcaagatgaactattttataatttgatgcaattt
ggcttatccatgagcccacttattctttcgaccgtatgtagcatcgttctcaatctatat
tatcatttgcgtacagagctaaaagtgcagcttgaagctttcatttcatgtgtgcttttg
aagcttgtgcaaagcaagcatgggttttcataccaacagcaagaagttgctatggaagct
ttggttgacctttgcagtcaacatatgtttgtggccgagatgtatgctaattttgattgt
gatataacatgcagtaatgtttttgaagacattgcttacatgttgtccaagagtgcattt
cctgtgaatgagccgctatctgcaatgcatatccttgctttgaatggtctggtatctatt
ataaaaggtatggctaagagaacctgtaatgaattgtctatttcggaggaggattcaaca
aattatgagggatatgaagctttttggactttgaaatgtctgaattacaatgatcctagt
tcttggattccttttgttcgtaaaatgaaacgcatcaagagaaagttgacaattggagct
gaccattttaatcgagatcccaagaaaggtctagagtttctccagggaatccatttacta
ccagataagcttgatccggaaagtgtagcgtctttctttaggtacacaaatgggttagat
aagaatcttattggagattttcttggtaatcatggtgaattttgtgttcacgtgcttcat
gaattttctaggacctttgatttccatgacatgactttagattcagcattacgtgttttc
ttgggaactttccgcttacctggagagtcacaaaagatacagagagtgattgaggcattt
gctgaaagatattatgagcaatcatcacatttattttgtgatagagatgctacccttctg
ttgtcatattcacttataatgcttaacactgatcaacacaatgcccaagtcaagaaaaag
atgactgaagaagattttattcgtaacaatcgactcatcaatggggggaaagatcttcct
cgcgagtacttgtccgagctttaccactctatctgtgagaatgagattcagatgatccct
gaccaaggtgctggtttcccaacaatgacattaagccgctggattaatgtgatatataga
tccaaagaaagtgctccttttattttatgtgattctcgagtgcccctctaccacgatatg
tttgctatcttgtctggccccactattgccgctatatcagtggttttcgatcaagcagaa
caggaaaatgttttacaaacatgcattgatggattcttggccattgccaaaatttcaaca
cactatcgctttggcgatatattggatgatttggttgtatctctttgtaaattcacaacc
cttttgactccattatctttcgaagatgccattatttccttcggagatggtcctagagca
aggatggcaaccacaactgttttcaccatagcaaataaatatggtgattgtatccatagc
agttggagaagcatattcgattgtgttttgagcttgcacaagctcagacttctgcctccc
agtctagctaatgatgcagctgatgaaacagattcctcatctgattatgtatggagtaag
cctgatacgagttccttattaatatcacggacaactcctgcagccatcccccggaggtcc
ttcagcttgtttggtaggttcagccaactcttatcctttgaagtggaggaaccactgttg
catccaactcatgaacagcttgctgctcaacagttccttcgagagatagtgctaaaatgc
cacatcgataatatattcatggatagcaagttcctccaagcagagtctttattgcagctt
gttgaggctatcatcttggctacagttcaattcagcaagggaagtgacattatagaagat
gaagatagtgccgtgttctgcctggagttgctgatttctattactctaaataatcgggat
aggattttgattatctggaaaaatgtttacaagtttctatcagatattgttcaacagaag
gcaatgccttgtgctctagtggagaaagctgtgtttgggctccttaagatatgccaacgt
ttgcttccttacaaggaaaatttaactgatgagcttttaaagtcgatgcaactaattttg
agacttgatgctcgagttgctgatgcatattgtgaacctattactcaagaagttatgcga
cttgtaaaagctaatgcgtctcacatcagatcccattctggttggcacacaatcatctcc
ttgctatatatcactgctcaacatccagaagcatcagagtttgggtttgaggctctagcg
ttcatcatgttcgatggggcacatcttttgccttctaattatgttctttgtgtggatgca
gcaagggagtttgctgagtctcgggttggagagattgataggtctatttcttccttagaa
atgatggcaagttctgttgtttgtctcgtaagatggtcttacgaagccaagaatactgcc
aacgaagaggctgctatgaaagtgagtaaggaccttggagagatgtggctgaggttattg
caggcactgaaggttgtatgtttagaccagagggaggaggtgcgaaaccatgctatttta
atgttacaacggtcttttgcaggtgttggtggaatttccattccgaacactatttggttc
cagtgttttaatcttgtcgtttttacattaatggatgatttgctagaaattgcactgggg
agctcccctaaagaatacaagaaaatggaaggtacacttgttttagccacaaaactaatg
ttgaaagctttcttacaatcacttgaggaattgtcacagcaagcatccttctgcaaacta
tggctcgaagttctcgatcgtatggagagatatatgaagtttaagttccgaggaaagcat
agtgaaaaaattcatgaatcaatcccggagcttctcaagaataccctactggtgatgaaa
acaactggtattctcatacctagtgatgatgttggcagagatagtttttggcaattgaca
tggctaaatgtgaagaagatactcccatctttgcaatctgaagtgttcttggaaccagaa
ttggagcagatgcaagcaaaacacaaaaagatatctggaattcccgcaaccaatgagaca
atgctcattccatcaaatgagacaacaacatga
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