Gossypium hirsutum (upland cotton): 107943899
Help
Entry
107943899 CDS
T04793
Name
(RefSeq) mechanosensitive ion channel protein 3, chloroplastic
KO
K22047
mechanosensitive ion channel protein 1/2/3
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107943899
Transporters [BR:
ghi02000
]
Other transporters
Pores ion channels [TC:
1
]
107943899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MSL2_3
Msl2-3_C
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-GeneID:
107943899
NCBI-ProteinID:
XP_016733198
UniProt:
A0A1U8N5S1
LinkDB
All DBs
Position
A06:3978739..3985150
Genome browser
AA seq
687 aa
AA seq
DB search
MALVATMQLSNELKVHDSHGCSRQNIGVVEKGRLHLVRTNLSSHAMRQDAWSLHLLGSAC
RPIRPVYSRSNVVLCRSVLIPTGGNEVPILKSASMCLTRAFGNLHGSPIIPQLISAVAII
AFAAWGLGPLMQLGRVILFHRSNSSWKKSRTHHIMSYYLRPMLLCTGVTLICRALDPVVL
PSEASQAVKQRLLHFVRSLSTVLAFSYCLSSLIQQAQKFFMEMNDSNDARNMGFDFAGKA
VYTAVWVAAVSLFMELLGFSTQRWVTAGGLGTVLITLAGREIFTNFLSSVMIHATRPFVV
NEWIQTKIDGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNISQKTHWRIK
NYFAISHLDVNKINNVVADMRKVLAKNPQVEQQRLHRRVFLESIDPQNQALLILVSCFVK
TSHIEEYLCVKEAIMLDLLRVISHHRARLATPIRTVQKIYSEPEIEDIPFADTIFRRSGA
ATNRPLLLIEPAYKINSDDKAKAPTRANEEILTPTSTSDSKGNTNSGSALDSKEDKVMAS
STNNSGLSSNESGNSVPVGSVEVNSEKQLSESKGETRKATSSGRVPVPNPQSANEESEIP
LGVSQAKQDVDNKPVPVPSVARPASLEENIVLGVALEGSKLTLPIEEEMSAEIEEMGSHQ
NGSRSHSVGQDKKDNGKSVVHGGAPNN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgttgctactatgcaattgtctaatgaactgaaagttcacgatagtcatgga
tgcagtcgccagaacattggtgttgtagaaaaaggccgattacatttagttcgtaccaat
ctttcctcgcatgctatgcgacaggatgcttggagtctacatcttttgggcagtgcttgt
aggcccataagacctgtatattcgaggtctaatgtcgttctctgccgatctgttctgatt
cctactggaggaaatgaggttcctatattaaaatctgcgagcatgtgtttgacaagggca
tttggtaatttacatggaagtcctataatacctcagttgatctcagcggttgcgattatt
gcttttgctgcatggggtcttgggccacttatgcagctgggcagggttatccttttccat
aggagcaatagcagttggaagaaaagtagaacacatcatattatgagctattatcttcga
cccatgctgctgtgtactggagtgacacttatctgcagagcattagatccagtagtttta
ccctcagaagcaagtcaggctgttaagcaacgactcctacattttgtgcgatcattatca
acagttcttgctttttcttattgtttgtcaagcctgattcaacaggcccaaaaattcttt
atggagatgaatgactccaatgatgcaagaaatatgggctttgactttgctggaaaagct
gtttatactgctgtatgggttgctgctgtatcattgttcatggagttgttaggtttttcc
acccaaaggtgggtaactgctggaggacttggtacagtattgatcacccttgctggtcgt
gagatatttacaaattttctttcaagtgtaatgatccatgcaacaagaccgtttgttgtc
aatgaatggattcaaactaaaatagacggctatgaagtttcagggacagtcgagcatgta
ggatggtggtcgccaacaattataagaggtgatgaccgtgaagcagttcacattccaaac
cacaagttcactgtgaatgttgtgaggaacattagccagaagactcattggcgcatcaag
aattactttgccattagtcatttggatgttaacaaaatcaataatgtagtagcagacatg
cggaaggttttagccaaaaatcctcaagtagagcagcaaagattgcatagaagagtattt
ttggaaagtatcgatccacaaaaccaggctcttttgatattggtatcttgttttgtgaaa
acttcacatatcgaagaatacctctgtgttaaggaagccataatgttggatcttctcaga
gttattagccatcatcgtgcccggcttgccacccctatccgcacggttcagaaaatatac
agtgagcctgaaatagaagatataccctttgctgatactattttcagacgctctggagcg
gctaccaaccgtccacttctcctcattgaacccgcttataaaatcaacagtgatgacaaa
gccaaagctccaacacgtgcaaacgaagaaatactaactccaacctcaacatctgactcg
aagggaaatactaactccggatcagcattggactccaaagaagacaaagttatggcttca
tcaaccaataattctggtttaagttcaaacgaaagtgggaactcggtgcctgttggttca
gttgaagtcaactctgaaaagcaactcagtgagagcaagggtgaaacccgaaaggcaaca
agctcgggaagggttccagtacctaatccacaatccgcaaatgaagaatccgaaatccca
ttgggtgtttcacaagcaaagcaggatgttgataataagcctgtaccggtaccatccgta
gccaggccggcttccttggaagagaacatcgttcttggtgttgcactggagggctcaaaa
ctgacccttccaatcgaggaagaaatgtctgcagaaatagaggaaatgggcagtcaccag
aatggaagtaggtctcattcggtcggccaggacaagaaagacaatgggaagtcggtagtt
catggtggcgcaccgaataattag
DBGET
integrated database retrieval system
